Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm20794-201ENSMUST00000177626 628 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.86□□□□□ -2.11
Trim43bP86448 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.86□□□□□ -2.11
Trim43bP86448 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.86□□□□□ -2.11
Trim43bP86448 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.86□□□□□ -2.11
Trim43bP86448 Gm5900-201ENSMUST00000179862 375 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.86□□□□□ -2.11
Trim43bP86448 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.86□□□□□ -2.11
Trim43bP86448 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.86□□□□□ -2.11
Trim43bP86448 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.86□□□□□ -2.11
Trim43bP86448 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.86□□□□□ -2.11
Trim43bP86448 Gm27991-201ENSMUST00000184804 137 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 Gm28356-202ENSMUST00000187566 858 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 Gm20885-201ENSMUST00000190192 654 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 Gm33571-201ENSMUST00000193271 657 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 Gm36866-201ENSMUST00000193343 657 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 Gm36047-201ENSMUST00000193659 657 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 Gm20857-201ENSMUST00000194766 657 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 Gm20858-201ENSMUST00000195459 657 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.86□□□□□ -2.11
Trim43bP86448 Gm18635-201ENSMUST00000199020 1060 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 Gm44125-201ENSMUST00000203068 448 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.86□□□□□ -2.11
Trim43bP86448 Gm5317-201ENSMUST00000204445 847 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.86□□□□□ -2.11
Trim43bP86448 Gm43865-201ENSMUST00000204721 127 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.86□□□□□ -2.11
Trim43bP86448 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 Gm46994-201ENSMUST00000221523 219 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 Gm5955-201ENSMUST00000222712 219 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.86□□□□□ -2.11
Trim43bP86448 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trim43bP86448 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trim43bP86448 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trim43bP86448 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trim43bP86448 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trim43bP86448 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
Trim43bP86448 AC122887.2-201ENSMUST00000219465 1603 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trim43bP86448 Gm23109-201ENSMUST00000116867 126 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Gm14359-201ENSMUST00000118883 424 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Gm14360-201ENSMUST00000120670 393 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Gm9498-201ENSMUST00000140849 291 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC1.85□□□□□ -2.11
Trim43bP86448 Gm25961-201ENSMUST00000157174 135 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Gm23048-201ENSMUST00000157237 129 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Gm25836-201ENSMUST00000158918 123 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Gm2930-201ENSMUST00000170403 474 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Gm9892-201ENSMUST00000182415 992 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Gm20058-201ENSMUST00000186939 284 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Gm38044-201ENSMUST00000192964 487 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Gm43402-201ENSMUST00000197159 159 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Gm44324-201ENSMUST00000198517 135 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Gm45150-201ENSMUST00000206051 467 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trim43bP86448 Gm22061-201ENSMUST00000082557 107 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Gm23727-201ENSMUST00000083352 164 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.85□□□□□ -2.11
Trim43bP86448 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trim43bP86448 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Trim43bP86448 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.11
Trim43bP86448 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trim43bP86448 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.11
Trim43bP86448 Mir873a-201ENSMUST00000104863 77 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trim43bP86448 Gm24907-201ENSMUST00000116932 128 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Gm14868-201ENSMUST00000117840 216 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Gm15497-201ENSMUST00000119137 551 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Gm11363-201ENSMUST00000121672 548 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Gm16355-201ENSMUST00000128606 231 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.84□□□□□ -2.11
Trim43bP86448 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.84□□□□□ -2.11
Trim43bP86448 Gm23538-201ENSMUST00000157535 101 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Gm22603-201ENSMUST00000157603 96 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.84□□□□□ -2.11
Trim43bP86448 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Gm25194-201ENSMUST00000177987 79 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Mir7026-201ENSMUST00000184384 67 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Gm28666-201ENSMUST00000186649 274 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.84□□□□□ -2.11
Trim43bP86448 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC1.84□□□□□ -2.11
Trim43bP86448 Gm43978-201ENSMUST00000203491 451 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.84□□□□□ -2.11
Trim43bP86448 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.84□□□□□ -2.11
Trim43bP86448 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trim43bP86448 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trim43bP86448 AC125532.1-201ENSMUST00000216210 2334 ntBASIC1.83□□□□□ -2.12
Trim43bP86448 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.83□□□□□ -2.12
Trim43bP86448 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trim43bP86448 Gm12096-201ENSMUST00000121149 829 ntBASIC1.83□□□□□ -2.12
Trim43bP86448 Gm26256-201ENSMUST00000122499 186 ntBASIC1.83□□□□□ -2.12
Trim43bP86448 Gm24908-201ENSMUST00000157294 127 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms