Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm16261-201ENSMUST00000096813 205 ntBASIC1.89□□□□□ -2.11
Tpm1P58771 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.89□□□□□ -2.11
Tpm1P58771 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.89□□□□□ -2.11
Tpm1P58771 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Tpm1P58771 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Tpm1P58771 Gm14774-201ENSMUST00000117857 536 ntBASIC1.88□□□□□ -2.11
Tpm1P58771 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Tpm1P58771 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.88□□□□□ -2.11
Tpm1P58771 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.88□□□□□ -2.11
Tpm1P58771 Gm23387-201ENSMUST00000158586 107 ntBASIC1.88□□□□□ -2.11
Tpm1P58771 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC1.88□□□□□ -2.11
Tpm1P58771 Gm26864-201ENSMUST00000181346 156 ntBASIC1.88□□□□□ -2.11
Tpm1P58771 Gm28011-201ENSMUST00000184097 175 ntBASIC1.88□□□□□ -2.11
Tpm1P58771 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC1.88□□□□□ -2.11
Tpm1P58771 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.88□□□□□ -2.11
Tpm1P58771 Gm9068-201ENSMUST00000217393 455 ntBASIC1.88□□□□□ -2.11
Tpm1P58771 Gm25813-201ENSMUST00000082748 191 ntBASIC1.88□□□□□ -2.11
Tpm1P58771 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Tpm1P58771 Mir873a-201ENSMUST00000104863 77 ntBASIC1.87□□□□□ -2.11
Tpm1P58771 Gm15110-201ENSMUST00000117545 881 ntBASIC1.87□□□□□ -2.11
Tpm1P58771 Gm11845-201ENSMUST00000117886 327 ntBASIC1.87□□□□□ -2.11
Tpm1P58771 Gm9703-201ENSMUST00000119573 343 ntBASIC1.87□□□□□ -2.11
Tpm1P58771 Gm14898-201ENSMUST00000120202 645 ntBASIC1.87□□□□□ -2.11
Tpm1P58771 Trav20-201ENSMUST00000142754 347 ntBASIC1.87□□□□□ -2.11
Tpm1P58771 Gm25194-201ENSMUST00000177987 79 ntBASIC1.87□□□□□ -2.11
Tpm1P58771 Gm32175-201ENSMUST00000193641 346 ntBASIC1.87□□□□□ -2.11
Tpm1P58771 Gm45387-201ENSMUST00000209792 632 ntBASIC1.87□□□□□ -2.11
Tpm1P58771 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.87□□□□□ -2.11
Tpm1P58771 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.87□□□□□ -2.11
Tpm1P58771 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Tpm1P58771 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.87□□□□□ -2.11
Tpm1P58771 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Tpm1P58771 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Tpm1P58771 Gm23551-201ENSMUST00000116852 121 ntBASIC1.86□□□□□ -2.11
Tpm1P58771 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.86□□□□□ -2.11
Tpm1P58771 Gm22718-201ENSMUST00000122701 315 ntBASIC1.86□□□□□ -2.11
Tpm1P58771 Gm23032-201ENSMUST00000157995 107 ntBASIC1.86□□□□□ -2.11
Tpm1P58771 Gm24222-201ENSMUST00000158834 93 ntBASIC1.86□□□□□ -2.11
Tpm1P58771 Gm6660-201ENSMUST00000179149 468 ntBASIC1.86□□□□□ -2.11
Tpm1P58771 Gm23648-201ENSMUST00000180301 107 ntBASIC1.86□□□□□ -2.11
Tpm1P58771 Gm27265-201ENSMUST00000183559 77 ntBASIC1.86□□□□□ -2.11
Tpm1P58771 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.86□□□□□ -2.11
Tpm1P58771 Mir6993-201ENSMUST00000184912 65 ntBASIC1.86□□□□□ -2.11
Tpm1P58771 Igkv13-82-201ENSMUST00000200308 346 ntBASIC1.86□□□□□ -2.11
Tpm1P58771 Gm44256-201ENSMUST00000203304 335 ntBASIC1.86□□□□□ -2.11
Tpm1P58771 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.86□□□□□ -2.11
Tpm1P58771 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.86□□□□□ -2.11
Tpm1P58771 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Tpm1P58771 Gm23506-201ENSMUST00000083077 107 ntBASIC1.86□□□□□ -2.11
Tpm1P58771 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.86□□□□□ -2.11
Tpm1P58771 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.85□□□□□ -2.11
Tpm1P58771 Gm22936-201ENSMUST00000103955 126 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Tpm1P58771 Gm22091-201ENSMUST00000116908 127 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Mup-ps14-201ENSMUST00000118437 532 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Gm13903-201ENSMUST00000120945 193 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Mup-ps2-201ENSMUST00000142602 533 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Gm26157-201ENSMUST00000158974 126 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.85□□□□□ -2.11
Tpm1P58771 Gm27248-201ENSMUST00000184004 166 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Gm27245-201ENSMUST00000184385 376 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Gm38238-201ENSMUST00000194334 346 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Gm42647-201ENSMUST00000195939 459 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Snord43-201ENSMUST00000199549 108 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Gm44125-201ENSMUST00000203068 448 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Gm44988-201ENSMUST00000203835 1161 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Tpm1P58771 Gm45101-201ENSMUST00000208327 232 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Gm44554-201ENSMUST00000208738 147 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Gm35558-202ENSMUST00000221819 499 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC1.85□□□□□ -2.11
Tpm1P58771 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Gm23246-201ENSMUST00000083371 67 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Mir151-201ENSMUST00000083678 68 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Gm23741-201ENSMUST00000097237 171 ntBASIC1.85□□□□□ -2.11
Tpm1P58771 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.84□□□□□ -2.11
Tpm1P58771 Mdga2-203ENSMUST00000113942 423 ntBASIC1.84□□□□□ -2.11
Tpm1P58771 Mir1195-201ENSMUST00000116818 98 ntBASIC1.84□□□□□ -2.11
Tpm1P58771 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.84□□□□□ -2.11
Tpm1P58771 Gm25994-201ENSMUST00000175392 101 ntBASIC1.84□□□□□ -2.11
Tpm1P58771 Gm19932-201ENSMUST00000177033 313 ntBASIC1.84□□□□□ -2.11
Tpm1P58771 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Tpm1P58771 Gm43578-201ENSMUST00000201250 459 ntBASIC1.84□□□□□ -2.11
Tpm1P58771 AC137902.2-201ENSMUST00000227989 576 ntBASIC1.84□□□□□ -2.11
Tpm1P58771 AC168062.2-201ENSMUST00000228907 422 ntBASIC1.84□□□□□ -2.11
Tpm1P58771 Gm23645-201ENSMUST00000083228 108 ntBASIC1.84□□□□□ -2.11
Tpm1P58771 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
Tpm1P58771 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Tpm1P58771 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.84□□□□□ -2.12
Tpm1P58771 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Tpm1P58771 Gm11854-201ENSMUST00000117839 446 ntBASIC1.83□□□□□ -2.12
Tpm1P58771 Gm6664-201ENSMUST00000119138 468 ntBASIC1.83□□□□□ -2.12
Tpm1P58771 Gm15536-201ENSMUST00000121411 114 ntBASIC1.83□□□□□ -2.12
Tpm1P58771 Gm13502-201ENSMUST00000121574 684 ntBASIC1.83□□□□□ -2.12
Tpm1P58771 Gm22891-201ENSMUST00000158641 164 ntBASIC1.83□□□□□ -2.12
Tpm1P58771 Gm24837-201ENSMUST00000158683 81 ntBASIC1.83□□□□□ -2.12
Tpm1P58771 Gm3102-201ENSMUST00000164236 489 ntBASIC1.83□□□□□ -2.12
Tpm1P58771 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms