Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm22572-201ENSMUST00000082985 105 ntBASIC2.85□□□□□ -1.95
NcanP55066 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NcanP55066 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NcanP55066 Gm45662-201ENSMUST00000210054 2098 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm22752-201ENSMUST00000102083 109 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm25274-201ENSMUST00000104296 135 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm6574-201ENSMUST00000120037 362 ntBASIC2.84□□□□□ -1.95
NcanP55066 AA413626-201ENSMUST00000121125 494 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm11849-201ENSMUST00000121293 261 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm12238-201ENSMUST00000127764 124 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm23124-201ENSMUST00000157650 107 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm22633-201ENSMUST00000179834 107 ntBASIC2.84□□□□□ -1.95
NcanP55066 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NcanP55066 Gm27991-201ENSMUST00000184804 137 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm21673-201ENSMUST00000186640 436 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm28628-201ENSMUST00000187006 264 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm28629-201ENSMUST00000187309 263 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.84□□□□□ -1.95
NcanP55066 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm21135-201ENSMUST00000189023 436 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm37658-201ENSMUST00000192672 315 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm37743-201ENSMUST00000194645 376 ntBASIC2.84□□□□□ -1.95
NcanP55066 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
NcanP55066 Mir6925-201ENSMUST00000197857 70 ntBASIC2.84□□□□□ -1.95
NcanP55066 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
NcanP55066 Gm8041-201ENSMUST00000199755 616 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm43901-201ENSMUST00000203247 453 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm7751-201ENSMUST00000212868 709 ntBASIC2.84□□□□□ -1.95
NcanP55066 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NcanP55066 Gm26922-201ENSMUST00000082687 72 ntBASIC2.84□□□□□ -1.95
NcanP55066 Rny3-201ENSMUST00000083011 102 ntBASIC2.84□□□□□ -1.95
NcanP55066 Gm22974-201ENSMUST00000083301 103 ntBASIC2.84□□□□□ -1.95
NcanP55066 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
NcanP55066 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.84□□□□□ -1.96
NcanP55066 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.84□□□□□ -1.96
NcanP55066 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.83□□□□□ -1.96
NcanP55066 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.83□□□□□ -1.96
NcanP55066 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
NcanP55066 Gm23987-201ENSMUST00000117039 129 ntBASIC2.83□□□□□ -1.96
NcanP55066 Gm25624-201ENSMUST00000157222 275 ntBASIC2.83□□□□□ -1.96
NcanP55066 Gm26101-201ENSMUST00000157246 105 ntBASIC2.83□□□□□ -1.96
NcanP55066 Gm22556-201ENSMUST00000157803 100 ntBASIC2.83□□□□□ -1.96
NcanP55066 Gm9071-201ENSMUST00000165915 474 ntBASIC2.83□□□□□ -1.96
NcanP55066 Gm17072-201ENSMUST00000166673 658 ntBASIC2.83□□□□□ -1.96
NcanP55066 Gm20698-201ENSMUST00000175657 233 ntBASIC2.83□□□□□ -1.96
NcanP55066 Gm7654-201ENSMUST00000186738 683 ntBASIC2.83□□□□□ -1.96
NcanP55066 Mir497-201ENSMUST00000200557 84 ntBASIC2.83□□□□□ -1.96
NcanP55066 Gm44041-201ENSMUST00000203678 396 ntBASIC2.83□□□□□ -1.96
NcanP55066 Gm45588-201ENSMUST00000211213 630 ntBASIC2.83□□□□□ -1.96
NcanP55066 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.83□□□□□ -1.96
NcanP55066 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.83□□□□□ -1.96
NcanP55066 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.83□□□□□ -1.96
NcanP55066 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
NcanP55066 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
NcanP55066 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NcanP55066 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.82□□□□□ -1.96
NcanP55066 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
NcanP55066 Gm25848-201ENSMUST00000116790 144 ntBASIC2.82□□□□□ -1.96
NcanP55066 Gm13614-201ENSMUST00000117306 503 ntBASIC2.82□□□□□ -1.96
NcanP55066 Gm12871-201ENSMUST00000118758 438 ntBASIC2.82□□□□□ -1.96
NcanP55066 Gm11582-201ENSMUST00000121041 236 ntBASIC2.82□□□□□ -1.96
NcanP55066 Gm14765-201ENSMUST00000121954 326 ntBASIC2.82□□□□□ -1.96
NcanP55066 Gm13368-201ENSMUST00000122443 430 ntBASIC2.82□□□□□ -1.96
NcanP55066 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.82□□□□□ -1.96
NcanP55066 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.82□□□□□ -1.96
NcanP55066 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
NcanP55066 Gm17186-201ENSMUST00000171742 456 ntBASIC2.82□□□□□ -1.96
NcanP55066 Mir6341-201ENSMUST00000183490 121 ntBASIC2.82□□□□□ -1.96
NcanP55066 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NcanP55066 Gm44425-201ENSMUST00000203739 429 ntBASIC2.82□□□□□ -1.96
NcanP55066 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
NcanP55066 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
NcanP55066 Gm22061-201ENSMUST00000082557 107 ntBASIC2.82□□□□□ -1.96
NcanP55066 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
NcanP55066 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NcanP55066 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
NcanP55066 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
NcanP55066 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NcanP55066 Gm12941-201ENSMUST00000117934 220 ntBASIC2.81□□□□□ -1.96
NcanP55066 Gm14918-201ENSMUST00000118153 268 ntBASIC2.81□□□□□ -1.96
NcanP55066 Gm15760-201ENSMUST00000119553 283 ntBASIC2.81□□□□□ -1.96
NcanP55066 Gm22957-201ENSMUST00000122511 123 ntBASIC2.81□□□□□ -1.96
NcanP55066 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NcanP55066 Gm24858-201ENSMUST00000158058 323 ntBASIC2.81□□□□□ -1.96
NcanP55066 Gm25836-201ENSMUST00000158918 123 ntBASIC2.81□□□□□ -1.96
NcanP55066 Gm27668-201ENSMUST00000184188 120 ntBASIC2.81□□□□□ -1.96
NcanP55066 Gm27245-201ENSMUST00000184385 376 ntBASIC2.81□□□□□ -1.96
NcanP55066 Gm44324-201ENSMUST00000198517 135 ntBASIC2.81□□□□□ -1.96
NcanP55066 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.81□□□□□ -1.96
NcanP55066 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NcanP55066 Gm19177-201ENSMUST00000204520 613 ntBASIC2.81□□□□□ -1.96
NcanP55066 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.81□□□□□ -1.96
NcanP55066 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.81□□□□□ -1.96
NcanP55066 AC192333.2-201ENSMUST00000224771 196 ntBASIC2.81□□□□□ -1.96
NcanP55066 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.81□□□□□ -1.96
NcanP55066 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.81□□□□□ -1.96
NcanP55066 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
NcanP55066 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms