Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.19□□□□□ -1.74
Sox1P53783 Gm30674-201ENSMUST00000214523 392 ntBASIC4.19□□□□□ -1.74
Sox1P53783 AC154994.1-201ENSMUST00000217395 302 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Gm18188-201ENSMUST00000219386 478 ntBASIC4.19□□□□□ -1.74
Sox1P53783 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.19□□□□□ -1.74
Sox1P53783 AC124746.2-201ENSMUST00000226594 427 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Gm26454-201ENSMUST00000082682 107 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Gm25896-201ENSMUST00000083713 136 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Gm26314-201ENSMUST00000083891 107 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Sox1P53783 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Sox1P53783 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.18□□□□□ -1.74
Sox1P53783 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Sox1P53783 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Sox1P53783 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.18□□□□□ -1.74
Sox1P53783 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
Sox1P53783 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Sox1P53783 Gm13321-201ENSMUST00000117101 400 ntBASIC4.18□□□□□ -1.74
Sox1P53783 Gm12793-201ENSMUST00000119268 292 ntBASIC4.18□□□□□ -1.74
Sox1P53783 n-R5s216-201ENSMUST00000122755 112 ntBASIC4.18□□□□□ -1.74
Sox1P53783 Gm23196-201ENSMUST00000158806 107 ntBASIC4.18□□□□□ -1.74
Sox1P53783 Gm19427-201ENSMUST00000183619 208 ntBASIC4.18□□□□□ -1.74
Sox1P53783 Mir6938-201ENSMUST00000184173 63 ntBASIC4.18□□□□□ -1.74
Sox1P53783 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.18□□□□□ -1.74
Sox1P53783 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.18□□□□□ -1.74
Sox1P53783 AC101945.1-201ENSMUST00000226734 466 ntBASIC4.18□□□□□ -1.74
Sox1P53783 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.18□□□□□ -1.74
Sox1P53783 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Sox1P53783 Gm25800-201ENSMUST00000082636 134 ntBASIC4.18□□□□□ -1.74
Sox1P53783 Gm22294-201ENSMUST00000083308 104 ntBASIC4.18□□□□□ -1.74
Sox1P53783 Mir370-201ENSMUST00000083499 79 ntBASIC4.18□□□□□ -1.74
Sox1P53783 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.18□□□□□ -1.74
Sox1P53783 Gm37941-201ENSMUST00000192170 2309 ntBASIC4.18□□□□□ -1.74
Sox1P53783 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.18□□□□□ -1.74
Sox1P53783 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Sox1P53783 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Sox1P53783 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Sox1P53783 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Sox1P53783 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.18□□□□□ -1.74
Sox1P53783 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Sox1P53783 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Sox1P53783 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Sox1P53783 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.17□□□□□ -1.74
Sox1P53783 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.17□□□□□ -1.74
Sox1P53783 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.17□□□□□ -1.74
Sox1P53783 Mir294-201ENSMUST00000104710 84 ntBASIC4.17□□□□□ -1.74
Sox1P53783 Gm24132-201ENSMUST00000104745 91 ntBASIC4.17□□□□□ -1.74
Sox1P53783 Gm12071-201ENSMUST00000121968 469 ntBASIC4.17□□□□□ -1.74
Sox1P53783 Gm23641-201ENSMUST00000157857 101 ntBASIC4.17□□□□□ -1.74
Sox1P53783 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Sox1P53783 Gm43704-201ENSMUST00000196164 496 ntBASIC4.17□□□□□ -1.74
Sox1P53783 Mir465d-201ENSMUST00000196314 58 ntBASIC4.17□□□□□ -1.74
Sox1P53783 Gm43649-201ENSMUST00000196596 391 ntBASIC4.17□□□□□ -1.74
Sox1P53783 Gm44519-201ENSMUST00000206486 122 ntBASIC4.17□□□□□ -1.74
Sox1P53783 Gm17779-201ENSMUST00000213395 394 ntBASIC4.17□□□□□ -1.74
Sox1P53783 CT030247.1-201ENSMUST00000216810 267 ntBASIC4.17□□□□□ -1.74
Sox1P53783 Gm22247-201ENSMUST00000082476 131 ntBASIC4.17□□□□□ -1.74
Sox1P53783 Gm25200-201ENSMUST00000083094 130 ntBASIC4.17□□□□□ -1.74
Sox1P53783 Gm25821-201ENSMUST00000093657 133 ntBASIC4.17□□□□□ -1.74
Sox1P53783 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Sox1P53783 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Sox1P53783 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Sox1P53783 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.17□□□□□ -1.74
Sox1P53783 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.16□□□□□ -1.74
Sox1P53783 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Sox1P53783 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Sox1P53783 Gm13504-201ENSMUST00000117490 316 ntBASIC4.16□□□□□ -1.74
Sox1P53783 Gm23496-201ENSMUST00000157741 248 ntBASIC4.16□□□□□ -1.74
Sox1P53783 Gm22989-201ENSMUST00000158313 86 ntBASIC4.16□□□□□ -1.74
Sox1P53783 Gm25490-201ENSMUST00000158734 130 ntBASIC4.16□□□□□ -1.74
Sox1P53783 Gm5967-201ENSMUST00000172723 494 ntBASIC4.16□□□□□ -1.74
Sox1P53783 Gm23571-201ENSMUST00000180073 127 ntBASIC4.16□□□□□ -1.74
Sox1P53783 Gm7182-201ENSMUST00000193351 732 ntBASIC4.16□□□□□ -1.74
Sox1P53783 Gm21007-201ENSMUST00000221024 326 ntBASIC4.16□□□□□ -1.74
Sox1P53783 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC4.16□□□□□ -1.74
Sox1P53783 AC166830.2-201ENSMUST00000225821 196 ntBASIC4.16□□□□□ -1.74
Sox1P53783 AC123533.1-201ENSMUST00000227782 446 ntBASIC4.16□□□□□ -1.74
Sox1P53783 Gm9765-201ENSMUST00000043170 321 ntBASIC4.16□□□□□ -1.74
Sox1P53783 Gm23510-201ENSMUST00000083083 163 ntBASIC4.16□□□□□ -1.74
Sox1P53783 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Sox1P53783 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.16□□□□□ -1.74
Sox1P53783 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.16□□□□□ -1.74
Sox1P53783 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Sox1P53783 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Sox1P53783 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.15□□□□□ -1.74
Sox1P53783 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Sox1P53783 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Sox1P53783 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Sox1P53783 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
Sox1P53783 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.15□□□□□ -1.75
Sox1P53783 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
Sox1P53783 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Sox1P53783 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Sox1P53783 Gm6829-201ENSMUST00000119858 360 ntBASIC4.15□□□□□ -1.75
Sox1P53783 Gm11819-201ENSMUST00000122192 372 ntBASIC4.15□□□□□ -1.75
Sox1P53783 n-R5s179-201ENSMUST00000122564 118 ntBASIC4.15□□□□□ -1.75
Sox1P53783 Gm25115-201ENSMUST00000157187 140 ntBASIC4.15□□□□□ -1.75
Sox1P53783 Gm24727-201ENSMUST00000158231 144 ntBASIC4.15□□□□□ -1.75
Sox1P53783 Gm25436-201ENSMUST00000158275 145 ntBASIC4.15□□□□□ -1.75
Sox1P53783 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms