Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.71□□□□□ -1.82
Shmt1P50431 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.71□□□□□ -1.82
Shmt1P50431 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Shmt1P50431 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.71□□□□□ -1.82
Shmt1P50431 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Shmt1P50431 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Shmt1P50431 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Shmt1P50431 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Shmt1P50431 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Shmt1P50431 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Shmt1P50431 Gm26387-201ENSMUST00000104238 132 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 Gm22496-201ENSMUST00000104493 88 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 Gm22497-201ENSMUST00000104499 131 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 Gm12686-201ENSMUST00000120546 397 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 Gm23829-201ENSMUST00000157392 270 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 Gm23759-201ENSMUST00000158351 268 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 Snord92-201ENSMUST00000175548 85 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 Gm25175-201ENSMUST00000178712 79 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 Gm18384-201ENSMUST00000195974 808 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 Gm8274-201ENSMUST00000219820 463 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC3.7□□□□□ -1.82
Shmt1P50431 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Shmt1P50431 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 Snord35b-201ENSMUST00000082833 87 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Shmt1P50431 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Shmt1P50431 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Shmt1P50431 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Shmt1P50431 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Shmt1P50431 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.7□□□□□ -1.82
Shmt1P50431 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Shmt1P50431 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Shmt1P50431 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Shmt1P50431 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Shmt1P50431 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.69□□□□□ -1.82
Shmt1P50431 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Shmt1P50431 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Shmt1P50431 Gm24376-201ENSMUST00000104399 127 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 Mir466h-201ENSMUST00000104748 81 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 Gm14811-201ENSMUST00000117070 117 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 Gm15760-201ENSMUST00000119553 283 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 Gm12042-201ENSMUST00000120479 301 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 Gm22814-201ENSMUST00000157452 104 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 Gm27510-201ENSMUST00000158214 64 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.69□□□□□ -1.82
Shmt1P50431 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Shmt1P50431 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.69□□□□□ -1.82
Shmt1P50431 Gm7958-201ENSMUST00000178255 468 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 Gm7950-201ENSMUST00000179633 468 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Shmt1P50431 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Shmt1P50431 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 Gm39147-201ENSMUST00000211376 465 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Shmt1P50431 Gm24457-201ENSMUST00000083196 105 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 Gm25482-201ENSMUST00000083225 107 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.69□□□□□ -1.82
Shmt1P50431 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Shmt1P50431 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Shmt1P50431 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Shmt1P50431 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Shmt1P50431 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Shmt1P50431 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Shmt1P50431 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Shmt1P50431 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Shmt1P50431 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Shmt1P50431 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Shmt1P50431 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Shmt1P50431 Gm23530-201ENSMUST00000104564 137 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 Gm23653-201ENSMUST00000116751 97 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 Gm13329-201ENSMUST00000117063 265 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 Gm13967-201ENSMUST00000120404 380 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 Gm14581-201ENSMUST00000121726 198 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 Gm24936-201ENSMUST00000122598 247 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.68□□□□□ -1.82
Shmt1P50431 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Shmt1P50431 Gm22328-201ENSMUST00000158074 112 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 Gm25519-201ENSMUST00000158392 127 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Shmt1P50431 Gm23860-201ENSMUST00000179446 132 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 Mir7578-201ENSMUST00000183455 82 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 Mir6715-201ENSMUST00000184990 57 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Shmt1P50431 Gm38060-201ENSMUST00000194822 464 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.68□□□□□ -1.82
Shmt1P50431 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 Gm42526-201ENSMUST00000198956 393 ntBASIC3.68□□□□□ -1.82
Shmt1P50431 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Shmt1P50431 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms