Protein–RNA interactions for Protein: P37913

Lig1, DNA ligase 1, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1P37913 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.73□□□□□ -1.81
Lig1P37913 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.73□□□□□ -1.81
Lig1P37913 Gm37029-201ENSMUST00000195773 239 ntBASIC3.73□□□□□ -1.81
Lig1P37913 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.73□□□□□ -1.81
Lig1P37913 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.73□□□□□ -1.81
Lig1P37913 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.73□□□□□ -1.81
Lig1P37913 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC3.73□□□□□ -1.81
Lig1P37913 Gm44655-201ENSMUST00000207768 423 ntBASIC3.73□□□□□ -1.81
Lig1P37913 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.73□□□□□ -1.81
Lig1P37913 Gm18921-201ENSMUST00000221798 366 ntBASIC3.73□□□□□ -1.81
Lig1P37913 Gm25411-201ENSMUST00000083760 151 ntBASIC3.73□□□□□ -1.81
Lig1P37913 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Lig1P37913 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Lig1P37913 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.72□□□□□ -1.81
Lig1P37913 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.72□□□□□ -1.81
Lig1P37913 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.72□□□□□ -1.81
Lig1P37913 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Lig1P37913 Mir687-201ENSMUST00000102166 89 ntBASIC3.72□□□□□ -1.81
Lig1P37913 Gm22073-201ENSMUST00000122668 189 ntBASIC3.72□□□□□ -1.81
Lig1P37913 Gm26149-201ENSMUST00000157432 108 ntBASIC3.72□□□□□ -1.81
Lig1P37913 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Lig1P37913 Gm9696-202ENSMUST00000191541 830 ntBASIC3.72□□□□□ -1.81
Lig1P37913 Gm32033-201ENSMUST00000193483 339 ntBASIC3.72□□□□□ -1.81
Lig1P37913 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.72□□□□□ -1.81
Lig1P37913 Gm44811-201ENSMUST00000209120 228 ntBASIC3.72□□□□□ -1.81
Lig1P37913 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.72□□□□□ -1.81
Lig1P37913 Gm45815-201ENSMUST00000220241 146 ntBASIC3.72□□□□□ -1.81
Lig1P37913 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.72□□□□□ -1.81
Lig1P37913 AC239878.2-201ENSMUST00000224048 464 ntBASIC3.72□□□□□ -1.81
Lig1P37913 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Lig1P37913 Gm23721-201ENSMUST00000083005 107 ntBASIC3.72□□□□□ -1.81
Lig1P37913 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Lig1P37913 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.72□□□□□ -1.81
Lig1P37913 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.71□□□□□ -1.81
Lig1P37913 Gm14768-201ENSMUST00000122126 678 ntBASIC3.71□□□□□ -1.82
Lig1P37913 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.71□□□□□ -1.82
Lig1P37913 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.71□□□□□ -1.82
Lig1P37913 Gm26102-201ENSMUST00000157251 284 ntBASIC3.71□□□□□ -1.82
Lig1P37913 Gm16232-201ENSMUST00000162856 167 ntBASIC3.71□□□□□ -1.82
Lig1P37913 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.71□□□□□ -1.82
Lig1P37913 Mir6914-201ENSMUST00000184999 69 ntBASIC3.71□□□□□ -1.82
Lig1P37913 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Lig1P37913 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.71□□□□□ -1.82
Lig1P37913 Gm7837-201ENSMUST00000190873 412 ntBASIC3.71□□□□□ -1.82
Lig1P37913 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC3.71□□□□□ -1.82
Lig1P37913 AC170600.1-201ENSMUST00000228763 277 ntBASIC3.71□□□□□ -1.82
Lig1P37913 Gm23615-201ENSMUST00000082602 65 ntBASIC3.71□□□□□ -1.82
Lig1P37913 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.71□□□□□ -1.82
Lig1P37913 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Lig1P37913 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lig1P37913 Gm12238-201ENSMUST00000127764 124 ntBASIC3.7□□□□□ -1.82
Lig1P37913 Gm24914-201ENSMUST00000157285 313 ntBASIC3.7□□□□□ -1.82
Lig1P37913 Gm26501-201ENSMUST00000178307 107 ntBASIC3.7□□□□□ -1.82
Lig1P37913 Gm22951-201ENSMUST00000179471 107 ntBASIC3.7□□□□□ -1.82
Lig1P37913 Gm37616-201ENSMUST00000193974 322 ntBASIC3.7□□□□□ -1.82
Lig1P37913 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.7□□□□□ -1.82
Lig1P37913 Gm44419-201ENSMUST00000203338 229 ntBASIC3.7□□□□□ -1.82
Lig1P37913 Gm44446-201ENSMUST00000204864 255 ntBASIC3.7□□□□□ -1.82
Lig1P37913 Gm6842-201ENSMUST00000211361 390 ntBASIC3.7□□□□□ -1.82
Lig1P37913 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.7□□□□□ -1.82
Lig1P37913 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Lig1P37913 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lig1P37913 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Lig1P37913 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lig1P37913 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.69□□□□□ -1.82
Lig1P37913 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Lig1P37913 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.69□□□□□ -1.82
Lig1P37913 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lig1P37913 Gm25539-201ENSMUST00000116886 122 ntBASIC3.69□□□□□ -1.82
Lig1P37913 Gm22722-201ENSMUST00000157467 132 ntBASIC3.69□□□□□ -1.82
Lig1P37913 Gm22833-201ENSMUST00000158292 132 ntBASIC3.69□□□□□ -1.82
Lig1P37913 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.69□□□□□ -1.82
Lig1P37913 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lig1P37913 Gm24618-201ENSMUST00000177718 94 ntBASIC3.69□□□□□ -1.82
Lig1P37913 Gm23953-201ENSMUST00000178214 94 ntBASIC3.69□□□□□ -1.82
Lig1P37913 Gm26332-201ENSMUST00000179813 94 ntBASIC3.69□□□□□ -1.82
Lig1P37913 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lig1P37913 Gm22863-201ENSMUST00000180265 94 ntBASIC3.69□□□□□ -1.82
Lig1P37913 Gm27410-201ENSMUST00000183851 115 ntBASIC3.69□□□□□ -1.82
Lig1P37913 Mir7227-201ENSMUST00000200408 59 ntBASIC3.69□□□□□ -1.82
Lig1P37913 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.69□□□□□ -1.82
Lig1P37913 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.69□□□□□ -1.82
Lig1P37913 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.69□□□□□ -1.82
Lig1P37913 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lig1P37913 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lig1P37913 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lig1P37913 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Lig1P37913 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.68□□□□□ -1.82
Lig1P37913 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.68□□□□□ -1.82
Lig1P37913 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lig1P37913 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lig1P37913 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lig1P37913 Gm22939-201ENSMUST00000103958 131 ntBASIC3.68□□□□□ -1.82
Lig1P37913 Defb44-ps-201ENSMUST00000126871 219 ntBASIC3.68□□□□□ -1.82
Lig1P37913 Gm3370-201ENSMUST00000171785 500 ntBASIC3.68□□□□□ -1.82
Lig1P37913 Gm26400-201ENSMUST00000175012 85 ntBASIC3.68□□□□□ -1.82
Lig1P37913 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.68□□□□□ -1.82
Lig1P37913 Gm24264-201ENSMUST00000179835 94 ntBASIC3.68□□□□□ -1.82
Lig1P37913 Gm18486-201ENSMUST00000184040 298 ntBASIC3.68□□□□□ -1.82
Lig1P37913 Gm8242-202ENSMUST00000193056 475 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms