Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Mir466h-201ENSMUST00000104748 81 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Usp4P35123 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Usp4P35123 Gm24831-201ENSMUST00000116778 126 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Gm24630-201ENSMUST00000122768 106 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.86□□□□□ -1.79
Usp4P35123 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Usp4P35123 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Usp4P35123 Gm24481-201ENSMUST00000157210 102 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Gm22561-201ENSMUST00000157331 84 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Gm27723-201ENSMUST00000157398 63 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Gm25572-201ENSMUST00000157527 172 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Gm22842-201ENSMUST00000157709 118 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Gm22890-201ENSMUST00000158642 144 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Gm17187-201ENSMUST00000164622 410 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Gm22911-201ENSMUST00000177920 107 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Gm27535-201ENSMUST00000183814 157 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Gm44513-201ENSMUST00000206811 439 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Gm44844-201ENSMUST00000207242 336 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Gm18921-201ENSMUST00000221798 366 ntBASIC3.86□□□□□ -1.79
Usp4P35123 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.86□□□□□ -1.79
Usp4P35123 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.86□□□□□ -1.79
Usp4P35123 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Usp4P35123 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
Usp4P35123 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.86□□□□□ -1.79
Usp4P35123 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Usp4P35123 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Usp4P35123 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Usp4P35123 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Usp4P35123 Gm24640-201ENSMUST00000116949 126 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm22626-201ENSMUST00000116990 126 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm15002-201ENSMUST00000118406 452 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm15029-201ENSMUST00000119742 199 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm26414-201ENSMUST00000157674 269 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm3370-201ENSMUST00000171785 500 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm24818-201ENSMUST00000175093 161 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm22108-201ENSMUST00000177961 106 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Mup-ps11-201ENSMUST00000178040 545 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Mup-ps3-201ENSMUST00000178315 545 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm24798-201ENSMUST00000179334 106 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm24761-201ENSMUST00000179589 127 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm24488-201ENSMUST00000179934 127 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm25701-201ENSMUST00000179988 127 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm26431-201ENSMUST00000180199 127 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm29262-201ENSMUST00000190084 196 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm37575-201ENSMUST00000195467 309 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm7422-201ENSMUST00000220115 640 ntBASIC3.85□□□□□ -1.79
Usp4P35123 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.85□□□□□ -1.79
Usp4P35123 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.85□□□□□ -1.79
Usp4P35123 AC151833.1-201ENSMUST00000227752 574 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm5265-201ENSMUST00000076828 342 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm22806-201ENSMUST00000082738 136 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm25482-201ENSMUST00000083225 107 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm22353-201ENSMUST00000083918 136 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Usp4P35123 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.85□□□□□ -1.79
Usp4P35123 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Usp4P35123 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.84□□□□□ -1.79
Usp4P35123 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Usp4P35123 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.84□□□□□ -1.79
Usp4P35123 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Usp4P35123 Gm7853-201ENSMUST00000100708 478 ntBASIC3.84□□□□□ -1.79
Usp4P35123 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Usp4P35123 Gm23988-201ENSMUST00000117034 122 ntBASIC3.84□□□□□ -1.79
Usp4P35123 Gm14774-201ENSMUST00000117857 536 ntBASIC3.84□□□□□ -1.79
Usp4P35123 Gm15268-201ENSMUST00000118845 352 ntBASIC3.84□□□□□ -1.79
Usp4P35123 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.84□□□□□ -1.79
Usp4P35123 Gm8840-201ENSMUST00000122454 386 ntBASIC3.84□□□□□ -1.79
Usp4P35123 Gm23540-201ENSMUST00000157543 164 ntBASIC3.84□□□□□ -1.79
Usp4P35123 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.84□□□□□ -1.79
Usp4P35123 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.84□□□□□ -1.79
Usp4P35123 Gm7909-201ENSMUST00000182688 614 ntBASIC3.84□□□□□ -1.79
Usp4P35123 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.84□□□□□ -1.79
Usp4P35123 Gm44473-201ENSMUST00000204039 152 ntBASIC3.84□□□□□ -1.79
Usp4P35123 Gm45508-201ENSMUST00000209298 299 ntBASIC3.84□□□□□ -1.79
Usp4P35123 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.84□□□□□ -1.79
Usp4P35123 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Usp4P35123 Gm26457-201ENSMUST00000082678 78 ntBASIC3.84□□□□□ -1.79
Usp4P35123 Gm24457-201ENSMUST00000083196 105 ntBASIC3.84□□□□□ -1.79
Usp4P35123 Gm25481-201ENSMUST00000083221 158 ntBASIC3.84□□□□□ -1.79
Usp4P35123 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Usp4P35123 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Usp4P35123 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Usp4P35123 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Usp4P35123 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Usp4P35123 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
Usp4P35123 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.83□□□□□ -1.8
Usp4P35123 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Usp4P35123 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.83□□□□□ -1.8
Usp4P35123 Gm22107-201ENSMUST00000122548 100 ntBASIC3.83□□□□□ -1.8
Usp4P35123 Gm26148-201ENSMUST00000157430 68 ntBASIC3.83□□□□□ -1.8
Usp4P35123 Gm24553-201ENSMUST00000158653 131 ntBASIC3.83□□□□□ -1.8
Usp4P35123 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.83□□□□□ -1.8
Usp4P35123 Spin2g-201ENSMUST00000178425 687 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms