Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm24490-201ENSMUST00000083803 98 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Sdc1P18828 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.82□□□□□ -2.12
Sdc1P18828 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Sdc1P18828 Mdga2-203ENSMUST00000113942 423 ntBASIC1.82□□□□□ -2.12
Sdc1P18828 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC1.82□□□□□ -2.12
Sdc1P18828 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.82□□□□□ -2.12
Sdc1P18828 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Sdc1P18828 Gm23813-201ENSMUST00000175153 77 ntBASIC1.82□□□□□ -2.12
Sdc1P18828 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Sdc1P18828 Gm23145-201ENSMUST00000178912 79 ntBASIC1.82□□□□□ -2.12
Sdc1P18828 Gm8532-201ENSMUST00000179174 461 ntBASIC1.82□□□□□ -2.12
Sdc1P18828 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
Sdc1P18828 Gm37119-201ENSMUST00000195691 389 ntBASIC1.82□□□□□ -2.12
Sdc1P18828 Gm42925-201ENSMUST00000197359 285 ntBASIC1.82□□□□□ -2.12
Sdc1P18828 Gm42672-201ENSMUST00000197821 352 ntBASIC1.82□□□□□ -2.12
Sdc1P18828 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC1.82□□□□□ -2.12
Sdc1P18828 Gm19032-201ENSMUST00000208584 592 ntBASIC1.82□□□□□ -2.12
Sdc1P18828 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.82□□□□□ -2.12
Sdc1P18828 AC170810.3-201ENSMUST00000226177 374 ntBASIC1.82□□□□□ -2.12
Sdc1P18828 AC166344.2-201ENSMUST00000226747 374 ntBASIC1.82□□□□□ -2.12
Sdc1P18828 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC1.82□□□□□ -2.12
Sdc1P18828 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Sdc1P18828 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Sdc1P18828 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.81□□□□□ -2.12
Sdc1P18828 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
Sdc1P18828 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Sdc1P18828 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Sdc1P18828 Mir687-201ENSMUST00000102166 89 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Mir673-201ENSMUST00000102361 91 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm22115-201ENSMUST00000103976 133 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm23923-201ENSMUST00000104108 133 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Mir190b-201ENSMUST00000104803 80 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm14013-201ENSMUST00000119006 270 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm22792-201ENSMUST00000157225 133 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm22817-201ENSMUST00000157448 356 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm23752-201ENSMUST00000157584 115 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm26005-201ENSMUST00000158802 134 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm23196-201ENSMUST00000158806 107 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Sdc1P18828 Gm23268-201ENSMUST00000175494 78 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.81□□□□□ -2.12
Sdc1P18828 Gm37104-201ENSMUST00000193278 196 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.81□□□□□ -2.12
Sdc1P18828 Gm42164-201ENSMUST00000198881 379 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm43217-201ENSMUST00000199513 367 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.81□□□□□ -2.12
Sdc1P18828 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.81□□□□□ -2.12
Sdc1P18828 Gm43865-201ENSMUST00000204721 127 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm44212-201ENSMUST00000205016 897 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Sdc1P18828 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.81□□□□□ -2.12
Sdc1P18828 AC159297.2-201ENSMUST00000219567 1075 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC1.81□□□□□ -2.12
Sdc1P18828 CT571268.1-201ENSMUST00000222320 407 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm9370-201ENSMUST00000222787 609 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 CT010506.2-201ENSMUST00000225618 183 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm25402-201ENSMUST00000082966 131 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.81□□□□□ -2.12
Sdc1P18828 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Sdc1P18828 Gm381-201ENSMUST00000117443 2037 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 Gm22023-201ENSMUST00000104354 130 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 Gm22494-201ENSMUST00000104495 128 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 Gm22818-201ENSMUST00000157446 104 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 Gm24997-201ENSMUST00000157910 105 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 Gm25224-201ENSMUST00000158195 68 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 Snord11-201ENSMUST00000158468 84 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 Gm2719-201ENSMUST00000191929 444 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 Gm3724-201ENSMUST00000197957 349 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 Gm44449-201ENSMUST00000203610 153 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 Gm17890-201ENSMUST00000221419 757 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Sdc1P18828 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Sdc1P18828 Gm26263-201ENSMUST00000083281 164 ntBASIC1.8□□□□□ -2.12
Sdc1P18828 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.8□□□□□ -2.12
Sdc1P18828 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.79□□□□□ -2.12
Sdc1P18828 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Sdc1P18828 Gm24907-201ENSMUST00000116932 128 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 Gm13378-201ENSMUST00000117483 336 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 Gm12646-201ENSMUST00000119144 238 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 Gm6574-201ENSMUST00000120037 362 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 Gm12443-201ENSMUST00000122308 323 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 Gm23429-201ENSMUST00000122486 149 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Sdc1P18828 Gm15692-201ENSMUST00000152173 352 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 Gm24857-201ENSMUST00000158061 310 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 Gm25528-201ENSMUST00000180264 132 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 Gm28474-201ENSMUST00000188501 315 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC1.79□□□□□ -2.12
Sdc1P18828 Mir3068-202ENSMUST00000197755 79 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 Gm24350-202ENSMUST00000198309 132 ntBASIC1.79□□□□□ -2.12
Sdc1P18828 Gm31230-201ENSMUST00000199725 785 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms