Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Msx1P13297 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Msx1P13297 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Msx1P13297 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
Msx1P13297 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Msx1P13297 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.42□□□□□ -1.7
Msx1P13297 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.42□□□□□ -1.7
Msx1P13297 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Msx1P13297 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Msx1P13297 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Msx1P13297 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Msx1P13297 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Msx1P13297 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
Msx1P13297 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Msx1P13297 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Msx1P13297 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.41□□□□□ -1.7
Msx1P13297 Gm21034-201ENSMUST00000207390 2608 ntBASIC4.41□□□□□ -1.7
Msx1P13297 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Msx1P13297 Mir767-201ENSMUST00000103256 107 ntBASIC4.41□□□□□ -1.7
Msx1P13297 Gm5762-201ENSMUST00000119204 258 ntBASIC4.41□□□□□ -1.7
Msx1P13297 Gm13443-201ENSMUST00000120770 555 ntBASIC4.41□□□□□ -1.7
Msx1P13297 Gm13232-201ENSMUST00000121816 632 ntBASIC4.41□□□□□ -1.7
Msx1P13297 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.41□□□□□ -1.7
Msx1P13297 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Msx1P13297 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Msx1P13297 Gm43993-201ENSMUST00000203972 247 ntBASIC4.41□□□□□ -1.7
Msx1P13297 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.41□□□□□ -1.7
Msx1P13297 Gm44816-201ENSMUST00000206666 477 ntBASIC4.41□□□□□ -1.7
Msx1P13297 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Msx1P13297 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.41□□□□□ -1.7
Msx1P13297 Gm23928-201ENSMUST00000082469 145 ntBASIC4.41□□□□□ -1.7
Msx1P13297 Gm25134-201ENSMUST00000082646 160 ntBASIC4.41□□□□□ -1.7
Msx1P13297 Gm25142-201ENSMUST00000082698 107 ntBASIC4.41□□□□□ -1.7
Msx1P13297 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC4.41□□□□□ -1.7
Msx1P13297 Gm24030-201ENSMUST00000083931 164 ntBASIC4.41□□□□□ -1.7
Msx1P13297 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Msx1P13297 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Msx1P13297 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Msx1P13297 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
Msx1P13297 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Msx1P13297 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Msx1P13297 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Msx1P13297 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Msx1P13297 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Msx1P13297 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Msx1P13297 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
Msx1P13297 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
Msx1P13297 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Msx1P13297 Gm22473-201ENSMUST00000104114 132 ntBASIC4.4□□□□□ -1.71
Msx1P13297 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Msx1P13297 Gm12443-201ENSMUST00000122308 323 ntBASIC4.4□□□□□ -1.71
Msx1P13297 Gm24961-201ENSMUST00000157918 184 ntBASIC4.4□□□□□ -1.71
Msx1P13297 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Msx1P13297 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Msx1P13297 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Msx1P13297 Gm17522-201ENSMUST00000178144 498 ntBASIC4.4□□□□□ -1.71
Msx1P13297 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Msx1P13297 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Msx1P13297 Gm27445-201ENSMUST00000184484 72 ntBASIC4.4□□□□□ -1.71
Msx1P13297 Gm23370-202ENSMUST00000197008 129 ntBASIC4.4□□□□□ -1.71
Msx1P13297 Mir3969-201ENSMUST00000197106 92 ntBASIC4.4□□□□□ -1.71
Msx1P13297 Gm18982-201ENSMUST00000198118 529 ntBASIC4.4□□□□□ -1.71
Msx1P13297 Gm44485-201ENSMUST00000199569 137 ntBASIC4.4□□□□□ -1.71
Msx1P13297 Gm44932-201ENSMUST00000206799 121 ntBASIC4.4□□□□□ -1.71
Msx1P13297 AC122418.1-201ENSMUST00000225012 511 ntBASIC4.4□□□□□ -1.71
Msx1P13297 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Msx1P13297 Gm23300-201ENSMUST00000082712 125 ntBASIC4.4□□□□□ -1.71
Msx1P13297 Gm22421-201ENSMUST00000083058 107 ntBASIC4.4□□□□□ -1.71
Msx1P13297 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Msx1P13297 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Msx1P13297 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Msx1P13297 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.39□□□□□ -1.71
Msx1P13297 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.39□□□□□ -1.71
Msx1P13297 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Msx1P13297 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.39□□□□□ -1.71
Msx1P13297 Gm23273-201ENSMUST00000104058 135 ntBASIC4.39□□□□□ -1.71
Msx1P13297 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.39□□□□□ -1.71
Msx1P13297 Gm8129-201ENSMUST00000118230 213 ntBASIC4.39□□□□□ -1.71
Msx1P13297 Gm5391-201ENSMUST00000121155 613 ntBASIC4.39□□□□□ -1.71
Msx1P13297 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC4.39□□□□□ -1.71
Msx1P13297 Gm24745-201ENSMUST00000157840 85 ntBASIC4.39□□□□□ -1.71
Msx1P13297 Gm22314-201ENSMUST00000158007 281 ntBASIC4.39□□□□□ -1.71
Msx1P13297 Gm25923-201ENSMUST00000158312 138 ntBASIC4.39□□□□□ -1.71
Msx1P13297 Gm15796-201ENSMUST00000162135 204 ntBASIC4.39□□□□□ -1.71
Msx1P13297 Trav5-2-201ENSMUST00000199855 280 ntBASIC4.39□□□□□ -1.71
Msx1P13297 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.39□□□□□ -1.71
Msx1P13297 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.39□□□□□ -1.71
Msx1P13297 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.39□□□□□ -1.71
Msx1P13297 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Msx1P13297 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Msx1P13297 Mir466-201ENSMUST00000093591 73 ntBASIC4.39□□□□□ -1.71
Msx1P13297 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
Msx1P13297 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Msx1P13297 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Msx1P13297 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Msx1P13297 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.39□□□□□ -1.71
Msx1P13297 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.39□□□□□ -1.71
Msx1P13297 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.39□□□□□ -1.71
Msx1P13297 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Msx1P13297 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms