Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm29573-201ENSMUST00000190291 919 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Gm11898-201ENSMUST00000117161 385 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Gm15029-201ENSMUST00000119742 199 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Gm25961-201ENSMUST00000157174 135 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Gm2930-201ENSMUST00000170403 474 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Gm21885-201ENSMUST00000178891 327 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Gm29192-201ENSMUST00000190942 377 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Mir301-201ENSMUST00000083655 86 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Col1a1P11087 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.17□□□□□ -2.22
Col1a1P11087 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.17□□□□□ -2.22
Col1a1P11087 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Col1a1P11087 Gm12872-201ENSMUST00000121835 320 ntBASIC1.17□□□□□ -2.22
Col1a1P11087 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.17□□□□□ -2.22
Col1a1P11087 n-R5s192-201ENSMUST00000122577 119 ntBASIC1.17□□□□□ -2.22
Col1a1P11087 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Col1a1P11087 Gm7346-201ENSMUST00000169661 476 ntBASIC1.17□□□□□ -2.22
Col1a1P11087 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Col1a1P11087 Gm27599-201ENSMUST00000183758 174 ntBASIC1.17□□□□□ -2.22
Col1a1P11087 Igkv11-114-201ENSMUST00000200013 346 ntBASIC1.17□□□□□ -2.22
Col1a1P11087 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.17□□□□□ -2.22
Col1a1P11087 AC121960.3-201ENSMUST00000227077 623 ntBASIC1.17□□□□□ -2.22
Col1a1P11087 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Col1a1P11087 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Col1a1P11087 Gm24579-201ENSMUST00000103964 144 ntBASIC1.16□□□□□ -2.22
Col1a1P11087 Gm25495-201ENSMUST00000104431 131 ntBASIC1.16□□□□□ -2.22
Col1a1P11087 Gm14558-201ENSMUST00000117458 381 ntBASIC1.16□□□□□ -2.22
Col1a1P11087 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC1.16□□□□□ -2.22
Col1a1P11087 Gm13903-201ENSMUST00000120945 193 ntBASIC1.16□□□□□ -2.22
Col1a1P11087 Gm22431-201ENSMUST00000158545 107 ntBASIC1.16□□□□□ -2.22
Col1a1P11087 Gm17655-201ENSMUST00000167969 255 ntBASIC1.16□□□□□ -2.22
Col1a1P11087 Gm25730-201ENSMUST00000178753 165 ntBASIC1.16□□□□□ -2.22
Col1a1P11087 Gm19233-201ENSMUST00000219772 936 ntBASIC1.16□□□□□ -2.22
Col1a1P11087 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Col1a1P11087 Gm22293-201ENSMUST00000083314 109 ntBASIC1.16□□□□□ -2.22
Col1a1P11087 Mir208a-201ENSMUST00000083498 83 ntBASIC1.16□□□□□ -2.22
Col1a1P11087 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.16□□□□□ -2.22
Col1a1P11087 Gm25497-201ENSMUST00000104425 132 ntBASIC1.15□□□□□ -2.23
Col1a1P11087 Gm14879-201ENSMUST00000117308 507 ntBASIC1.15□□□□□ -2.23
Col1a1P11087 Gm15215-201ENSMUST00000117773 489 ntBASIC1.15□□□□□ -2.23
Col1a1P11087 Gm12392-201ENSMUST00000118014 938 ntBASIC1.15□□□□□ -2.23
Col1a1P11087 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.15□□□□□ -2.23
Col1a1P11087 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.15□□□□□ -2.23
Col1a1P11087 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.15□□□□□ -2.23
Col1a1P11087 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.15□□□□□ -2.23
Col1a1P11087 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.15□□□□□ -2.23
Col1a1P11087 Gm25079-201ENSMUST00000082529 203 ntBASIC1.15□□□□□ -2.23
Col1a1P11087 Gm26439-201ENSMUST00000082592 106 ntBASIC1.15□□□□□ -2.23
Col1a1P11087 Gm23975-201ENSMUST00000082685 106 ntBASIC1.15□□□□□ -2.23
Col1a1P11087 Gm25792-201ENSMUST00000083289 100 ntBASIC1.15□□□□□ -2.23
Col1a1P11087 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.15□□□□□ -2.23
Col1a1P11087 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
Col1a1P11087 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
Col1a1P11087 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
Col1a1P11087 Mir804-201ENSMUST00000103251 95 ntBASIC1.14□□□□□ -2.23
Col1a1P11087 Gm24911-201ENSMUST00000157292 136 ntBASIC1.14□□□□□ -2.23
Col1a1P11087 Gm17162-201ENSMUST00000168538 473 ntBASIC1.14□□□□□ -2.23
Col1a1P11087 Gm25994-201ENSMUST00000175392 101 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms