Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm9236-201ENSMUST00000196892 587 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.7□□□□□ -2.14
Col5a1O88207 Gm43224-201ENSMUST00000201567 898 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm45316-201ENSMUST00000210128 162 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm3442-201ENSMUST00000216808 710 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.7□□□□□ -2.14
Col5a1O88207 AC156560.1-201ENSMUST00000221425 256 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Col5a1O88207 Gm22265-201ENSMUST00000082947 116 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm25088-201ENSMUST00000101803 79 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm22771-201ENSMUST00000104449 91 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm14882-201ENSMUST00000117216 218 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm15087-201ENSMUST00000117465 1172 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm13913-201ENSMUST00000121126 260 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm16331-201ENSMUST00000144274 498 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm25666-201ENSMUST00000157702 107 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Col5a1O88207 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC1.7□□□□□ -2.14
Col5a1O88207 Gm28666-201ENSMUST00000186649 274 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm36984-201ENSMUST00000192770 235 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm42622-201ENSMUST00000197229 355 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm43431-201ENSMUST00000198577 340 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm45023-201ENSMUST00000207951 379 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC1.7□□□□□ -2.14
Col5a1O88207 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm46993-201ENSMUST00000220708 259 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC1.7□□□□□ -2.14
Col5a1O88207 AC115878.1-201ENSMUST00000227247 334 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm26439-201ENSMUST00000082592 106 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm24624-201ENSMUST00000082617 164 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm26206-201ENSMUST00000082908 110 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm26128-201ENSMUST00000083170 110 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm25008-201ENSMUST00000083809 81 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
Col5a1O88207 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Col5a1O88207 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Col5a1O88207 Gm11429-201ENSMUST00000119089 144 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm14591-201ENSMUST00000120407 518 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.69□□□□□ -2.14
Col5a1O88207 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Col5a1O88207 Gm25163-201ENSMUST00000158905 104 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm17186-201ENSMUST00000171742 456 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm24656-201ENSMUST00000177548 132 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm23648-201ENSMUST00000180301 107 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm27313-201ENSMUST00000183500 142 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm27233-201ENSMUST00000184030 307 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm29413-201ENSMUST00000186019 880 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Col5a1O88207 Gm29639-201ENSMUST00000188375 580 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC1.69□□□□□ -2.14
Col5a1O88207 Gm37692-201ENSMUST00000192633 232 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm37431-201ENSMUST00000195102 111 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm37417-201ENSMUST00000195257 454 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm35931-201ENSMUST00000203931 448 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm19244-201ENSMUST00000204340 253 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC1.69□□□□□ -2.14
Col5a1O88207 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 AC154245.1-201ENSMUST00000224615 601 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 AC110380.1-201ENSMUST00000226987 389 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 AC161572.1-201ENSMUST00000227486 640 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm23140-201ENSMUST00000082487 107 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm23506-201ENSMUST00000083077 107 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Gm22293-201ENSMUST00000083314 109 ntBASIC1.69□□□□□ -2.14
Col5a1O88207 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
Col5a1O88207 Gm24342-201ENSMUST00000103907 104 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm25876-201ENSMUST00000104329 119 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm22494-201ENSMUST00000104495 128 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm14020-201ENSMUST00000118165 662 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm26099-201ENSMUST00000157248 109 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm24060-201ENSMUST00000157494 95 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm25976-201ENSMUST00000158695 130 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Col5a1O88207 Gm17161-201ENSMUST00000169187 524 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm27539-201ENSMUST00000184971 224 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm29950-201ENSMUST00000195273 237 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC1.68□□□□□ -2.14
Col5a1O88207 Gm45048-201ENSMUST00000207058 429 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm18160-201ENSMUST00000214279 827 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Col5a1O88207 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
Col5a1O88207 Gm26384-201ENSMUST00000102183 110 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm12370-201ENSMUST00000117809 604 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm11219-201ENSMUST00000118565 358 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm12934-201ENSMUST00000119221 343 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
Col5a1O88207 Gm14411-201ENSMUST00000121798 914 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm23463-201ENSMUST00000122468 99 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC1.68□□□□□ -2.14
Col5a1O88207 Gm22228-201ENSMUST00000157364 101 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.68□□□□□ -2.14
Col5a1O88207 Gm18296-201ENSMUST00000192475 783 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms