Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm23697-201ENSMUST00000103897 110 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm22784-201ENSMUST00000104088 132 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm26273-201ENSMUST00000104180 131 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm14894-201ENSMUST00000117170 270 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm12173-201ENSMUST00000117622 273 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm6897-201ENSMUST00000117714 138 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm14758-201ENSMUST00000119104 138 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm13210-201ENSMUST00000121483 273 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm7618-201ENSMUST00000121643 171 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm15065-201ENSMUST00000121699 273 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm26279-201ENSMUST00000157095 102 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm25391-201ENSMUST00000157342 134 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm25720-201ENSMUST00000157503 105 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm25425-201ENSMUST00000157611 96 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm28020-201ENSMUST00000157739 67 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm17186-201ENSMUST00000171742 456 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm37449-201ENSMUST00000193016 270 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm32175-201ENSMUST00000193641 346 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm37417-201ENSMUST00000195257 454 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm18658-201ENSMUST00000195558 270 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 AC129017.1-201ENSMUST00000228363 270 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm25726-201ENSMUST00000104529 129 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm12722-201ENSMUST00000118507 493 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm16032-201ENSMUST00000118534 168 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm13831-201ENSMUST00000118764 302 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm14473-201ENSMUST00000122269 557 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm8840-201ENSMUST00000122454 386 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm22315-201ENSMUST00000158010 143 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm25834-201ENSMUST00000158916 101 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Mir6537-201ENSMUST00000184150 110 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm38270-201ENSMUST00000192721 407 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm4248-201ENSMUST00000196905 316 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 AC158955.1-201ENSMUST00000227140 385 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm24950-201ENSMUST00000082768 191 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm23971-201ENSMUST00000083317 191 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Mir383-201ENSMUST00000083523 70 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm23849-201ENSMUST00000083833 191 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Gm26316-201ENSMUST00000083886 191 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Pcdh1F7BJK1 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Gm24125-201ENSMUST00000104105 137 ntBASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Gm12797-201ENSMUST00000118645 273 ntBASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Gm23905-201ENSMUST00000157568 109 ntBASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Gm23640-201ENSMUST00000157860 104 ntBASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Gm24392-201ENSMUST00000158136 103 ntBASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Gm24667-201ENSMUST00000158938 103 ntBASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Gm5967-201ENSMUST00000172723 494 ntBASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Mir3104-201ENSMUST00000174911 63 ntBASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Gm19898-201ENSMUST00000177490 251 ntBASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Gm43978-201ENSMUST00000203491 451 ntBASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 AC155712.1-201ENSMUST00000219704 160 ntBASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Gm25581-201ENSMUST00000083410 164 ntBASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Pcdh1F7BJK1 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Gm15896-201ENSMUST00000118045 440 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Gm13314-201ENSMUST00000118742 335 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Gm13852-201ENSMUST00000122350 242 ntBASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.53□□□□□ -1.84
Pcdh1F7BJK1 Gm22337-201ENSMUST00000157721 132 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms