Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.59□□□□□ -1.99
Srp54bE9PXC0 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.59□□□□□ -1.99
Srp54bE9PXC0 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.59□□□□□ -1.99
Srp54bE9PXC0 Gm6030-201ENSMUST00000078768 402 ntBASIC2.59□□□□□ -1.99
Srp54bE9PXC0 Gm24150-201ENSMUST00000082759 104 ntBASIC2.59□□□□□ -1.99
Srp54bE9PXC0 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Srp54bE9PXC0 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.59□□□□□ -1.99
Srp54bE9PXC0 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
Srp54bE9PXC0 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.59□□□□□ -2
Srp54bE9PXC0 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Srp54bE9PXC0 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm12053-201ENSMUST00000119022 252 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm6574-201ENSMUST00000120037 362 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm11410-201ENSMUST00000120053 1143 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm14852-201ENSMUST00000120065 647 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm14638-201ENSMUST00000121338 216 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm16218-201ENSMUST00000155424 388 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm23956-201ENSMUST00000157211 119 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm20543-201ENSMUST00000174200 726 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm24168-201ENSMUST00000178825 107 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm22631-201ENSMUST00000179656 94 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Srp54bE9PXC0 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm44519-201ENSMUST00000206486 122 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 AC112274.2-201ENSMUST00000218436 170 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Snord104-201ENSMUST00000083192 70 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm23247-201ENSMUST00000083373 107 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm25859-201ENSMUST00000083710 91 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm23042-201ENSMUST00000083866 101 ntBASIC2.58□□□□□ -2
Srp54bE9PXC0 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm24670-201ENSMUST00000104154 132 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm24889-201ENSMUST00000104388 132 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm11065-201ENSMUST00000111462 228 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm13355-201ENSMUST00000117996 317 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm23895-201ENSMUST00000158108 160 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm24901-201ENSMUST00000158125 110 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm24075-201ENSMUST00000158175 72 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm25476-201ENSMUST00000175125 185 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Snord53-201ENSMUST00000175146 78 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm23862-201ENSMUST00000180342 94 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm5224-201ENSMUST00000183060 350 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm27957-201ENSMUST00000184054 127 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm28356-202ENSMUST00000187566 858 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm43245-201ENSMUST00000197603 468 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.57□□□□□ -2
Srp54bE9PXC0 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm45879-201ENSMUST00000212521 392 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm35558-203ENSMUST00000222264 204 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 AC108945.1-201ENSMUST00000226477 94 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm23096-201ENSMUST00000083447 107 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm23093-201ENSMUST00000083450 102 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm26108-201ENSMUST00000083973 191 ntBASIC2.57□□□□□ -2
Srp54bE9PXC0 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Srp54bE9PXC0 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Srp54bE9PXC0 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.56□□□□□ -2
Srp54bE9PXC0 Gm24274-201ENSMUST00000116787 124 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 Gm14293-201ENSMUST00000118528 577 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 n-R5s207-201ENSMUST00000122497 118 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.56□□□□□ -2
Srp54bE9PXC0 Gm23752-201ENSMUST00000157584 115 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 Gm24358-201ENSMUST00000158424 288 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 Gm15914-201ENSMUST00000161922 309 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.56□□□□□ -2
Srp54bE9PXC0 Mir7050-201ENSMUST00000184636 60 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 Gm27490-201ENSMUST00000184754 128 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 Gm28151-201ENSMUST00000189404 951 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 Gm28437-201ENSMUST00000190277 783 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.56□□□□□ -2
Srp54bE9PXC0 Gm44524-201ENSMUST00000203899 271 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 Gm44903-201ENSMUST00000206840 130 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 Gm18346-201ENSMUST00000216782 325 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 Gm18774-201ENSMUST00000218269 601 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Srp54bE9PXC0 Gm9174-201ENSMUST00000078149 255 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 Gm25199-201ENSMUST00000083095 104 ntBASIC2.56□□□□□ -2
Srp54bE9PXC0 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2.56□□□□□ -2
Srp54bE9PXC0 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Srp54bE9PXC0 Mir687-201ENSMUST00000102166 89 ntBASIC2.55□□□□□ -2
Srp54bE9PXC0 Gm22831-201ENSMUST00000102473 109 ntBASIC2.55□□□□□ -2
Srp54bE9PXC0 Gm14602-201ENSMUST00000118625 340 ntBASIC2.55□□□□□ -2
Srp54bE9PXC0 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.55□□□□□ -2
Srp54bE9PXC0 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Srp54bE9PXC0 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Srp54bE9PXC0 Gm26401-201ENSMUST00000158502 76 ntBASIC2.55□□□□□ -2
Srp54bE9PXC0 Gm24082-201ENSMUST00000175175 83 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms