Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Gm21726-201ENSMUST00000179654 392 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Gm28560-201ENSMUST00000186091 315 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Gm28334-201ENSMUST00000186653 315 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Gm28495-201ENSMUST00000188452 315 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Gm28232-201ENSMUST00000188683 315 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Gm28481-201ENSMUST00000189231 315 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Gm29059-201ENSMUST00000191534 315 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Gm37765-201ENSMUST00000192395 315 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Gm37237-201ENSMUST00000192893 315 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Trbv7-201ENSMUST00000193339 402 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Gm36968-201ENSMUST00000193737 315 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Gm38290-201ENSMUST00000195238 315 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Gm7871-201ENSMUST00000195346 618 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Gm42805-201ENSMUST00000196158 276 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Gm43652-201ENSMUST00000196219 675 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 AL669916.3-201ENSMUST00000213855 94 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 AL669916.6-201ENSMUST00000214610 94 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 AL669916.4-201ENSMUST00000215976 94 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 AL669916.1-201ENSMUST00000217640 94 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 AC154603.1-201ENSMUST00000224355 313 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC1.85□□□□□ -2.11
Ccdc112A0AUP1 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm23109-201ENSMUST00000116867 126 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm11854-201ENSMUST00000117839 446 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm15497-201ENSMUST00000119137 551 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm22817-201ENSMUST00000157448 356 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm25335-201ENSMUST00000158043 103 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm25658-201ENSMUST00000158472 128 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm8207-201ENSMUST00000171204 502 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm23933-201ENSMUST00000178405 79 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm24264-201ENSMUST00000179835 94 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm11395-201ENSMUST00000181011 499 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm28058-201ENSMUST00000186421 264 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm28383-201ENSMUST00000187563 139 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm29262-201ENSMUST00000190084 196 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm42665-201ENSMUST00000202100 586 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm18691-201ENSMUST00000203593 872 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm18453-201ENSMUST00000208000 626 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm45365-201ENSMUST00000209489 256 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm23650-201ENSMUST00000083355 70 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm25755-201ENSMUST00000083396 107 ntBASIC1.84□□□□□ -2.11
Ccdc112A0AUP1 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Ccdc112A0AUP1 AC125532.1-201ENSMUST00000216210 2334 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Gm25088-201ENSMUST00000101803 79 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Gm13714-201ENSMUST00000117313 221 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Gm2020-201ENSMUST00000145242 579 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Gm22143-201ENSMUST00000157401 203 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Gm26024-201ENSMUST00000158657 322 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Mir6382-201ENSMUST00000184055 110 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Mir7241-201ENSMUST00000184532 64 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Gm28283-201ENSMUST00000185509 178 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Gm43286-201ENSMUST00000197420 424 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Gm18635-201ENSMUST00000199020 1060 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Gm24406-201ENSMUST00000083026 128 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Gm25411-201ENSMUST00000083760 151 ntBASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ccdc112A0AUP1 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Ccdc112A0AUP1 Gm26377-201ENSMUST00000102184 108 ntBASIC1.82□□□□□ -2.12
Ccdc112A0AUP1 Gm15312-201ENSMUST00000118827 271 ntBASIC1.82□□□□□ -2.12
Ccdc112A0AUP1 Gm6444-201ENSMUST00000119611 458 ntBASIC1.82□□□□□ -2.12
Ccdc112A0AUP1 Gm13059-201ENSMUST00000119881 398 ntBASIC1.82□□□□□ -2.12
Ccdc112A0AUP1 Gm15309-201ENSMUST00000121644 240 ntBASIC1.82□□□□□ -2.12
Ccdc112A0AUP1 Gm12872-201ENSMUST00000121835 320 ntBASIC1.82□□□□□ -2.12
Ccdc112A0AUP1 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC1.82□□□□□ -2.12
Ccdc112A0AUP1 Gm25621-201ENSMUST00000157223 114 ntBASIC1.82□□□□□ -2.12
Ccdc112A0AUP1 Gm23718-201ENSMUST00000157350 307 ntBASIC1.82□□□□□ -2.12
Ccdc112A0AUP1 Gm22818-201ENSMUST00000157446 104 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms