Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm44320-201ENSMUST00000199276 86 ntBASIC0.46□□□□□ -2.34
Trav4-3A0A0B4J1K1 AC138401.1-201ENSMUST00000221533 116 ntBASIC0.46□□□□□ -2.34
Trav4-3A0A0B4J1K1 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.46□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm7984-201ENSMUST00000060640 538 ntBASIC0.46□□□□□ -2.34
Trav4-3A0A0B4J1K1 Snord7-201ENSMUST00000083781 97 ntBASIC0.46□□□□□ -2.34
Trav4-3A0A0B4J1K1 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm8161-201ENSMUST00000168739 481 ntBASIC0.45□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm23636-201ENSMUST00000175070 95 ntBASIC0.45□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm20698-201ENSMUST00000175657 233 ntBASIC0.45□□□□□ -2.34
Trav4-3A0A0B4J1K1 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC0.45□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm37193-201ENSMUST00000193087 513 ntBASIC0.45□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm38041-201ENSMUST00000194445 661 ntBASIC0.45□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm44654-201ENSMUST00000208052 329 ntBASIC0.45□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm45636-201ENSMUST00000210497 1064 ntBASIC0.45□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm26206-201ENSMUST00000082908 110 ntBASIC0.45□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.45□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm18360-201ENSMUST00000173327 1524 ntBASIC0.44□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm23010-201ENSMUST00000104151 126 ntBASIC0.44□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm24068-201ENSMUST00000104513 132 ntBASIC0.44□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm15126-201ENSMUST00000118631 833 ntBASIC0.44□□□□□ -2.34
Trav4-3A0A0B4J1K1 n-R5s216-201ENSMUST00000122755 112 ntBASIC0.44□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC0.44□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm22769-201ENSMUST00000158367 98 ntBASIC0.44□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm43245-201ENSMUST00000197603 468 ntBASIC0.44□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm43427-201ENSMUST00000198188 331 ntBASIC0.44□□□□□ -2.34
Trav4-3A0A0B4J1K1 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.44□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm43407-201ENSMUST00000199816 317 ntBASIC0.44□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm43171-201ENSMUST00000199882 291 ntBASIC0.44□□□□□ -2.34
Trav4-3A0A0B4J1K1 AC122901.2-201ENSMUST00000216926 285 ntBASIC0.44□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm46994-201ENSMUST00000221523 219 ntBASIC0.44□□□□□ -2.34
Trav4-3A0A0B4J1K1 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Trav4-3A0A0B4J1K1 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Trav4-3A0A0B4J1K1 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm22488-201ENSMUST00000116811 127 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm13409-201ENSMUST00000122072 546 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm22382-201ENSMUST00000158185 130 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm25768-201ENSMUST00000158570 98 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm18397-201ENSMUST00000176704 587 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm27660-201ENSMUST00000184028 208 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Mir7017-201ENSMUST00000184894 62 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm29005-201ENSMUST00000186773 320 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm29263-201ENSMUST00000188718 463 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm28384-201ENSMUST00000189079 463 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Igkv4-65-201ENSMUST00000196986 358 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Trav15d-3-201ENSMUST00000198604 167 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm43142-201ENSMUST00000198670 361 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Trav15n-3-201ENSMUST00000200498 168 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm8125-201ENSMUST00000216602 738 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm23727-201ENSMUST00000083352 164 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm5583-201ENSMUST00000174328 1519 ntBASIC0.43□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm13239-201ENSMUST00000119920 637 ntBASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm26275-201ENSMUST00000157101 268 ntBASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm3025-201ENSMUST00000163454 489 ntBASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm3111-201ENSMUST00000167426 490 ntBASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm27878-201ENSMUST00000184000 106 ntBASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm27517-201ENSMUST00000184347 236 ntBASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm7871-201ENSMUST00000195346 618 ntBASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm34139-201ENSMUST00000196166 294 ntBASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm42807-201ENSMUST00000200141 329 ntBASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm35736-201ENSMUST00000203681 313 ntBASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 AC126043.1-201ENSMUST00000221304 1141 ntBASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Snord96a-201ENSMUST00000082791 81 ntBASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Mir216a-201ENSMUST00000083605 72 ntBASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm23040-201ENSMUST00000083869 163 ntBASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm36989-201ENSMUST00000193225 2160 ntBASIC0.41□□□□□ -2.34
Trav4-3A0A0B4J1K1 Mir343-201ENSMUST00000102360 75 ntBASIC0.41□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm16400-201ENSMUST00000116523 1029 ntBASIC0.41□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm13356-201ENSMUST00000121678 335 ntBASIC0.41□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm11471-201ENSMUST00000121824 198 ntBASIC0.41□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm24385-201ENSMUST00000122694 350 ntBASIC0.41□□□□□ -2.34
Trav4-3A0A0B4J1K1 n-R5s187-201ENSMUST00000122769 111 ntBASIC0.41□□□□□ -2.34
Trav4-3A0A0B4J1K1 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC0.41□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm23752-201ENSMUST00000157584 115 ntBASIC0.41□□□□□ -2.34
Trav4-3A0A0B4J1K1 Gm24747-201ENSMUST00000157835 87 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms