Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm43991-201ENSMUST00000203751 274 ntBASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Gm45006-201ENSMUST00000206078 690 ntBASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Gm44563-201ENSMUST00000207958 178 ntBASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Gm24966-201ENSMUST00000082443 79 ntBASIC4.1□□□□□ -1.75
Trim39Q9ESN2 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Gm10360-201ENSMUST00000097219 272 ntBASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
Trim39Q9ESN2 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm22498-201ENSMUST00000104497 86 ntBASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm22899-201ENSMUST00000104540 131 ntBASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm16128-201ENSMUST00000117855 626 ntBASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm14878-201ENSMUST00000118167 293 ntBASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm13432-201ENSMUST00000118861 241 ntBASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm12304-201ENSMUST00000120312 385 ntBASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm25985-201ENSMUST00000122677 107 ntBASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm23513-201ENSMUST00000158181 133 ntBASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm26022-201ENSMUST00000158663 108 ntBASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm25447-201ENSMUST00000158997 128 ntBASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm7582-201ENSMUST00000160831 603 ntBASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm44054-201ENSMUST00000203814 372 ntBASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm44470-201ENSMUST00000203913 142 ntBASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim39Q9ESN2 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Trim39Q9ESN2 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.09□□□□□ -1.76
Trim39Q9ESN2 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Trim39Q9ESN2 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm15714-201ENSMUST00000117168 250 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm22320-201ENSMUST00000157149 312 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm23713-201ENSMUST00000157353 70 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm22615-201ENSMUST00000158102 70 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm25494-201ENSMUST00000158143 100 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm22529-201ENSMUST00000158817 123 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm26337-201ENSMUST00000178000 79 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm23922-201ENSMUST00000178792 79 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm24657-201ENSMUST00000180085 79 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm22996-201ENSMUST00000180236 79 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm29104-201ENSMUST00000186304 222 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm19096-201ENSMUST00000209705 766 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm3338-201ENSMUST00000220982 269 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm9174-201ENSMUST00000078149 255 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Gm23453-201ENSMUST00000083326 106 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Trim39Q9ESN2 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.08□□□□□ -1.76
Trim39Q9ESN2 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim39Q9ESN2 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.07□□□□□ -1.76
Trim39Q9ESN2 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Gm22314-201ENSMUST00000158007 281 ntBASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Gm26200-201ENSMUST00000180273 79 ntBASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Gm23925-202ENSMUST00000188429 132 ntBASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Trbv6-201ENSMUST00000193743 276 ntBASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Gm37693-201ENSMUST00000194562 234 ntBASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Gm38088-201ENSMUST00000195829 241 ntBASIC4.07□□□□□ -1.76
Trim39Q9ESN2 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Gm45392-201ENSMUST00000210441 214 ntBASIC4.07□□□□□ -1.76
Trim39Q9ESN2 AC165106.2-201ENSMUST00000226749 97 ntBASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Snord21-201ENSMUST00000082519 94 ntBASIC4.07□□□□□ -1.76
Trim39Q9ESN2 Gm23138-201ENSMUST00000083365 103 ntBASIC4.07□□□□□ -1.76
Trim39Q9ESN2 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 126.2 ms