Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm21726-201ENSMUST00000179654 392 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm23648-201ENSMUST00000180301 107 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm25873-201ENSMUST00000180317 107 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm37568-201ENSMUST00000191755 364 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm43402-201ENSMUST00000197159 159 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm42672-201ENSMUST00000197821 352 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm44524-201ENSMUST00000203899 271 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.77□□□□□ -2.13
Lima1Q9ERG0 AL669916.3-201ENSMUST00000213855 94 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 AL669916.6-201ENSMUST00000214610 94 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 AL669916.4-201ENSMUST00000215976 94 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 AL669916.1-201ENSMUST00000217640 94 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.77□□□□□ -2.13
Lima1Q9ERG0 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC1.77□□□□□ -2.13
Lima1Q9ERG0 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm23506-201ENSMUST00000083077 107 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.77□□□□□ -2.13
Lima1Q9ERG0 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Lima1Q9ERG0 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Mir467h-201ENSMUST00000116759 121 ntBASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Gm25624-201ENSMUST00000157222 275 ntBASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Gm21885-201ENSMUST00000178891 327 ntBASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Gm38231-201ENSMUST00000192030 347 ntBASIC1.76□□□□□ -2.13
Lima1Q9ERG0 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Gm43955-201ENSMUST00000204332 142 ntBASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Gm44615-201ENSMUST00000206548 358 ntBASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Gm46136-201ENSMUST00000214730 565 ntBASIC1.76□□□□□ -2.13
Lima1Q9ERG0 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.76□□□□□ -2.13
Lima1Q9ERG0 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Gm7984-201ENSMUST00000060640 538 ntBASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Gm16261-201ENSMUST00000096813 205 ntBASIC1.76□□□□□ -2.13
Lima1Q9ERG0 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Gm14292-201ENSMUST00000118761 456 ntBASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Gm12825-201ENSMUST00000120249 563 ntBASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Gm14709-201ENSMUST00000121225 304 ntBASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Gm22452-201ENSMUST00000122804 104 ntBASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Gm22382-201ENSMUST00000158185 130 ntBASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Gm23548-201ENSMUST00000158963 106 ntBASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Gm25707-201ENSMUST00000175120 96 ntBASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Gm45386-201ENSMUST00000210194 218 ntBASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Gm9068-201ENSMUST00000217393 455 ntBASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC1.75□□□□□ -2.13
Lima1Q9ERG0 AC167977.2-201ENSMUST00000225676 682 ntBASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Gm6369-201ENSMUST00000069626 412 ntBASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Gm22265-201ENSMUST00000082947 116 ntBASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Gm23733-201ENSMUST00000083750 106 ntBASIC1.75□□□□□ -2.13
Lima1Q9ERG0 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm15215-201ENSMUST00000117773 489 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm15312-201ENSMUST00000118827 271 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm14359-201ENSMUST00000118883 424 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm15177-201ENSMUST00000120491 577 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm14360-201ENSMUST00000120670 393 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm24836-201ENSMUST00000122609 108 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm9498-201ENSMUST00000140849 291 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Trav20-201ENSMUST00000142754 347 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm14368-201ENSMUST00000145305 415 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm25874-201ENSMUST00000178030 79 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm28412-201ENSMUST00000187243 177 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm37743-201ENSMUST00000194645 376 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm42739-201ENSMUST00000200687 226 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm43026-201ENSMUST00000202972 325 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm44125-201ENSMUST00000203068 448 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm18488-201ENSMUST00000215082 364 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm7065-201ENSMUST00000222150 474 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Gm24610-201ENSMUST00000083270 109 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Mir322-201ENSMUST00000083484 95 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Mir300-201ENSMUST00000083485 79 ntBASIC1.74□□□□□ -2.13
Lima1Q9ERG0 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Gm14932-201ENSMUST00000117112 453 ntBASIC1.73□□□□□ -2.13
Lima1Q9ERG0 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Gm22386-201ENSMUST00000158192 129 ntBASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Gm22765-201ENSMUST00000158371 128 ntBASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Gm3102-201ENSMUST00000164236 489 ntBASIC1.73□□□□□ -2.13
Lima1Q9ERG0 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 139.1 ms