Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm13541-201ENSMUST00000119519 283 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm24997-201ENSMUST00000157910 105 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm20542-201ENSMUST00000174582 372 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm27457-201ENSMUST00000184771 156 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm28830-201ENSMUST00000188192 213 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm29657-201ENSMUST00000189807 342 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm19123-201ENSMUST00000190716 651 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm5175-202ENSMUST00000219699 529 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 AC173482.5-201ENSMUST00000224181 327 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm23736-201ENSMUST00000082553 75 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm22062-201ENSMUST00000082563 107 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm23517-201ENSMUST00000082830 192 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Mir215-201ENSMUST00000083628 112 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm25896-201ENSMUST00000083713 136 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.87□□□□□ -1.79
Nkx6-1Q99MA9 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 AC144772.3-201ENSMUST00000228829 3126 ntBASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm11065-201ENSMUST00000111462 228 ntBASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm13714-201ENSMUST00000117313 221 ntBASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm22320-201ENSMUST00000157149 312 ntBASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm22145-201ENSMUST00000157396 148 ntBASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm22840-201ENSMUST00000158444 136 ntBASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm5967-201ENSMUST00000172723 494 ntBASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm20450-201ENSMUST00000173652 147 ntBASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm22348-201ENSMUST00000178674 79 ntBASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm22286-201ENSMUST00000179708 107 ntBASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm38238-201ENSMUST00000194334 346 ntBASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm44385-201ENSMUST00000198781 81 ntBASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 AC158982.2-201ENSMUST00000226283 184 ntBASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm24856-201ENSMUST00000082809 107 ntBASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Gm26314-201ENSMUST00000083891 107 ntBASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
Nkx6-1Q99MA9 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Gm23226-201ENSMUST00000116927 103 ntBASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Gm15268-201ENSMUST00000118845 352 ntBASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Gm25456-201ENSMUST00000157952 109 ntBASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Gm22135-201ENSMUST00000158752 108 ntBASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Gm43978-201ENSMUST00000203491 451 ntBASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Nkx6-1Q99MA9 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 Gm24376-201ENSMUST00000104399 127 ntBASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 Gm12071-201ENSMUST00000121968 469 ntBASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 Gm25392-201ENSMUST00000157335 297 ntBASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 Gm25066-201ENSMUST00000158145 123 ntBASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 Gm22156-201ENSMUST00000158409 141 ntBASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 Gm22398-201ENSMUST00000174941 125 ntBASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 Gm25731-201ENSMUST00000175167 125 ntBASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 Gm21893-201ENSMUST00000179119 397 ntBASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 Gm45553-201ENSMUST00000209929 507 ntBASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 AC155712.1-201ENSMUST00000219704 160 ntBASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.84□□□□□ -1.79
Nkx6-1Q99MA9 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms