Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm27761-201ENSMUST00000184091 131 ntBASIC2.57□□□□□ -2
Ddx39aQ8VDW0 Gm28744-201ENSMUST00000189939 340 ntBASIC2.57□□□□□ -2
Ddx39aQ8VDW0 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.57□□□□□ -2
Ddx39aQ8VDW0 Gm28169-201ENSMUST00000190342 345 ntBASIC2.57□□□□□ -2
Ddx39aQ8VDW0 AC111046.1-201ENSMUST00000217715 412 ntBASIC2.57□□□□□ -2
Ddx39aQ8VDW0 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC2.57□□□□□ -2
Ddx39aQ8VDW0 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.57□□□□□ -2
Ddx39aQ8VDW0 Gm19118-201ENSMUST00000222554 98 ntBASIC2.57□□□□□ -2
Ddx39aQ8VDW0 Gm22806-201ENSMUST00000082738 136 ntBASIC2.57□□□□□ -2
Ddx39aQ8VDW0 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Gm26341-201ENSMUST00000104561 134 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Gm13876-201ENSMUST00000118451 261 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Gm24439-201ENSMUST00000157894 117 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Gm23223-201ENSMUST00000158119 127 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Gm26622-201ENSMUST00000180520 298 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Gm21673-201ENSMUST00000186640 436 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Gm21135-201ENSMUST00000189023 436 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Gm28926-201ENSMUST00000191063 680 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Gm37455-201ENSMUST00000191993 529 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Gm42475-201ENSMUST00000201212 295 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Gm44060-201ENSMUST00000204440 410 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Gm44903-201ENSMUST00000206840 130 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Gm22508-201ENSMUST00000082772 110 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Gm23847-201ENSMUST00000083829 110 ntBASIC2.56□□□□□ -2
Ddx39aQ8VDW0 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ddx39aQ8VDW0 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Gm22779-201ENSMUST00000104085 107 ntBASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Mir669d-201ENSMUST00000104644 121 ntBASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Gm6568-201ENSMUST00000122274 697 ntBASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Gm25670-201ENSMUST00000178423 107 ntBASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Gm26239-201ENSMUST00000178842 107 ntBASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Gm24267-201ENSMUST00000179841 107 ntBASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Gm43007-201ENSMUST00000197618 291 ntBASIC2.55□□□□□ -2
Ddx39aQ8VDW0 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Gm20304-201ENSMUST00000218168 444 ntBASIC2.55□□□□□ -2
Ddx39aQ8VDW0 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Gm24292-201ENSMUST00000082888 107 ntBASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.55□□□□□ -2
Ddx39aQ8VDW0 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm22091-201ENSMUST00000116908 127 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm13355-201ENSMUST00000117996 317 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm14899-201ENSMUST00000118673 548 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm24937-201ENSMUST00000122597 134 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm22597-201ENSMUST00000157602 80 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm23068-201ENSMUST00000158239 293 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm23025-201ENSMUST00000158769 111 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Ddx39aQ8VDW0 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm27608-201ENSMUST00000184822 162 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm5329-201ENSMUST00000186898 463 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm25820-202ENSMUST00000197479 128 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm43550-201ENSMUST00000200597 303 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm29848-201ENSMUST00000203107 295 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm44135-201ENSMUST00000205221 368 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm9377-201ENSMUST00000207227 623 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm45658-201ENSMUST00000209197 580 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.54□□□□□ -2
Ddx39aQ8VDW0 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ddx39aQ8VDW0 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ddx39aQ8VDW0 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ddx39aQ8VDW0 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.53□□□□□ -2
Ddx39aQ8VDW0 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.53□□□□□ -2
Ddx39aQ8VDW0 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.53□□□□□ -2
Ddx39aQ8VDW0 Gm25485-201ENSMUST00000104120 132 ntBASIC2.53□□□□□ -2
Ddx39aQ8VDW0 Gm13433-201ENSMUST00000121701 240 ntBASIC2.53□□□□□ -2
Ddx39aQ8VDW0 Gm24839-201ENSMUST00000122602 107 ntBASIC2.53□□□□□ -2
Ddx39aQ8VDW0 Gm23599-201ENSMUST00000157261 251 ntBASIC2.53□□□□□ -2
Ddx39aQ8VDW0 Gm9593-201ENSMUST00000166034 469 ntBASIC2.53□□□□□ -2
Ddx39aQ8VDW0 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ddx39aQ8VDW0 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.53□□□□□ -2
Ddx39aQ8VDW0 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ddx39aQ8VDW0 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.53□□□□□ -2
Ddx39aQ8VDW0 Gm44990-201ENSMUST00000203922 217 ntBASIC2.53□□□□□ -2
Ddx39aQ8VDW0 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.53□□□□□ -2
Ddx39aQ8VDW0 Gm8940-201ENSMUST00000212585 219 ntBASIC2.53□□□□□ -2
Ddx39aQ8VDW0 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ddx39aQ8VDW0 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.53□□□□□ -2
Ddx39aQ8VDW0 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.53□□□□□ -2
Ddx39aQ8VDW0 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.53□□□□□ -2
Ddx39aQ8VDW0 Gm10298-201ENSMUST00000074801 265 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms