Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Ushbp1Q8R370 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ushbp1Q8R370 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Gm15844-201ENSMUST00000118016 576 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Gm14269-201ENSMUST00000120455 306 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Gm13153-201ENSMUST00000120969 637 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Gm22521-201ENSMUST00000158272 134 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Gm16232-201ENSMUST00000162856 167 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Gm23053-201ENSMUST00000175136 96 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Mir7k-201ENSMUST00000184115 110 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Gm28755-201ENSMUST00000185773 199 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Gm28650-201ENSMUST00000188413 411 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Gm42647-201ENSMUST00000195939 459 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Mir7118-201ENSMUST00000197760 61 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Gm35405-201ENSMUST00000218754 400 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ushbp1Q8R370 CT030170.3-201ENSMUST00000221205 1815 ntBASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.86□□□□□ -1.79
Ushbp1Q8R370 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Gm37642-201ENSMUST00000193166 1735 ntBASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Gm14562-201ENSMUST00000129885 543 ntBASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Gm23779-201ENSMUST00000157938 64 ntBASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Gm24819-201ENSMUST00000175094 166 ntBASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Gm28030-201ENSMUST00000184987 138 ntBASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Gm7329-201ENSMUST00000185915 210 ntBASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Gm28629-201ENSMUST00000187309 263 ntBASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Gm37128-201ENSMUST00000192599 232 ntBASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Gm37586-201ENSMUST00000193654 204 ntBASIC3.85□□□□□ -1.79
Ushbp1Q8R370 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.85□□□□□ -1.79
Ushbp1Q8R370 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.85□□□□□ -1.79
Ushbp1Q8R370 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.85□□□□□ -1.79
Ushbp1Q8R370 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.85□□□□□ -1.79
Ushbp1Q8R370 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm13343-201ENSMUST00000116474 105 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm14013-201ENSMUST00000119006 270 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm11363-201ENSMUST00000121672 548 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm23542-201ENSMUST00000158208 96 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm25360-201ENSMUST00000178786 191 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm32033-201ENSMUST00000193483 339 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm38356-201ENSMUST00000194313 408 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm37029-201ENSMUST00000195773 239 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm9379-201ENSMUST00000196790 646 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm18982-201ENSMUST00000198118 529 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm44419-201ENSMUST00000203338 229 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm44811-201ENSMUST00000209120 228 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 AC138290.2-201ENSMUST00000218822 369 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm25801-201ENSMUST00000082638 106 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Gm23412-201ENSMUST00000083017 107 ntBASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ushbp1Q8R370 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.84□□□□□ -1.8
Ushbp1Q8R370 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ushbp1Q8R370 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Ushbp1Q8R370 Gm9157-201ENSMUST00000117673 225 ntBASIC3.83□□□□□ -1.8
Ushbp1Q8R370 Defb44-ps-201ENSMUST00000126871 219 ntBASIC3.83□□□□□ -1.8
Ushbp1Q8R370 Gm26102-201ENSMUST00000157251 284 ntBASIC3.83□□□□□ -1.8
Ushbp1Q8R370 Gm17072-201ENSMUST00000166673 658 ntBASIC3.83□□□□□ -1.8
Ushbp1Q8R370 Gm24618-201ENSMUST00000177718 94 ntBASIC3.83□□□□□ -1.8
Ushbp1Q8R370 Gm23953-201ENSMUST00000178214 94 ntBASIC3.83□□□□□ -1.8
Ushbp1Q8R370 Gm26332-201ENSMUST00000179813 94 ntBASIC3.83□□□□□ -1.8
Ushbp1Q8R370 Gm22863-201ENSMUST00000180265 94 ntBASIC3.83□□□□□ -1.8
Ushbp1Q8R370 Gm29352-201ENSMUST00000188054 544 ntBASIC3.83□□□□□ -1.8
Ushbp1Q8R370 Gm8242-202ENSMUST00000193056 475 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms