Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
Pcdh19Q80TF3 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Pcdh19Q80TF3 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Pcdh19Q80TF3 Gm5596-201ENSMUST00000207988 2421 ntBASIC4.2□□□□□ -1.74
Pcdh19Q80TF3 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Gm23273-201ENSMUST00000104058 135 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Gm12173-201ENSMUST00000117622 273 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Gm13386-201ENSMUST00000117677 124 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Gm15613-201ENSMUST00000118396 326 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Gm22027-201ENSMUST00000122737 127 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Gm23044-201ENSMUST00000157891 100 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Gm7582-201ENSMUST00000160831 603 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Gm37300-201ENSMUST00000193327 280 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Gm37617-201ENSMUST00000194309 159 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Gm30341-201ENSMUST00000194363 289 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Gm44032-201ENSMUST00000204841 166 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Gm44650-201ENSMUST00000206929 194 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Gm44879-201ENSMUST00000207007 503 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Gm45778-201ENSMUST00000211959 153 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 AC098718.2-201ENSMUST00000226822 285 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh19Q80TF3 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Gm14922-201ENSMUST00000121131 163 ntBASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Gm23642-201ENSMUST00000157858 258 ntBASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Gm44519-201ENSMUST00000206486 122 ntBASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Gm18991-201ENSMUST00000209225 746 ntBASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Gm22247-201ENSMUST00000082476 131 ntBASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Gm37236-201ENSMUST00000193670 3249 ntBASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Pcdh19Q80TF3 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Gm22758-201ENSMUST00000102275 96 ntBASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Gm2182-201ENSMUST00000145243 663 ntBASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Gm25908-201ENSMUST00000157624 98 ntBASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Gm23196-201ENSMUST00000158806 107 ntBASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Gm25447-201ENSMUST00000158997 128 ntBASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Gm17100-201ENSMUST00000168963 272 ntBASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Mir6975-201ENSMUST00000184879 61 ntBASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Gm7449-201ENSMUST00000194393 663 ntBASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 AC192091.2-201ENSMUST00000217869 117 ntBASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Gm23517-201ENSMUST00000082830 192 ntBASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Mir202-201ENSMUST00000083568 72 ntBASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Mir146-201ENSMUST00000083667 65 ntBASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Pcdh19Q80TF3 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.16□□□□□ -1.74
Pcdh19Q80TF3 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.16□□□□□ -1.74
Pcdh19Q80TF3 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
Pcdh19Q80TF3 Gm12902-201ENSMUST00000118389 322 ntBASIC4.16□□□□□ -1.74
Pcdh19Q80TF3 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC4.16□□□□□ -1.74
Pcdh19Q80TF3 Gm22606-201ENSMUST00000158290 103 ntBASIC4.16□□□□□ -1.74
Pcdh19Q80TF3 Gm22156-201ENSMUST00000158409 141 ntBASIC4.16□□□□□ -1.74
Pcdh19Q80TF3 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.16□□□□□ -1.74
Pcdh19Q80TF3 Gm8790-201ENSMUST00000194108 322 ntBASIC4.16□□□□□ -1.74
Pcdh19Q80TF3 Gm43704-201ENSMUST00000196164 496 ntBASIC4.16□□□□□ -1.74
Pcdh19Q80TF3 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Pcdh19Q80TF3 Gm7468-201ENSMUST00000203900 652 ntBASIC4.16□□□□□ -1.74
Pcdh19Q80TF3 AC154262.1-201ENSMUST00000225976 286 ntBASIC4.16□□□□□ -1.74
Pcdh19Q80TF3 Gm24948-201ENSMUST00000082866 207 ntBASIC4.16□□□□□ -1.74
Pcdh19Q80TF3 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
Pcdh19Q80TF3 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms