Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC4.16□□□□□ -1.74
Sh3rf1Q69ZI1 Gm44520-201ENSMUST00000205447 802 ntBASIC4.16□□□□□ -1.74
Sh3rf1Q69ZI1 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC4.16□□□□□ -1.74
Sh3rf1Q69ZI1 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC4.16□□□□□ -1.74
Sh3rf1Q69ZI1 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Sh3rf1Q69ZI1 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.16□□□□□ -1.74
Sh3rf1Q69ZI1 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.16□□□□□ -1.74
Sh3rf1Q69ZI1 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Sh3rf1Q69ZI1 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.16□□□□□ -1.74
Sh3rf1Q69ZI1 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.15□□□□□ -1.74
Sh3rf1Q69ZI1 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.15□□□□□ -1.74
Sh3rf1Q69ZI1 Snora64-201ENSMUST00000104521 134 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm14537-201ENSMUST00000117464 599 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm12427-201ENSMUST00000117719 302 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm11931-201ENSMUST00000121630 447 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm10444-201ENSMUST00000126708 148 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm23752-201ENSMUST00000157584 115 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm23584-201ENSMUST00000157655 129 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm22098-201ENSMUST00000157930 85 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm17100-201ENSMUST00000168963 272 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm23922-201ENSMUST00000178792 79 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm24657-201ENSMUST00000180085 79 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm22996-201ENSMUST00000180236 79 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm37617-201ENSMUST00000194309 159 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm23454-201ENSMUST00000083332 133 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.15□□□□□ -1.75
Sh3rf1Q69ZI1 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Gm24172-201ENSMUST00000104127 117 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Gm15313-201ENSMUST00000119179 282 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Defa-ps8-201ENSMUST00000120972 279 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Gm24839-201ENSMUST00000122602 107 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Gm23982-201ENSMUST00000157141 106 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Gm22816-201ENSMUST00000157450 117 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Gm23585-201ENSMUST00000157656 102 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Gm25863-201ENSMUST00000158249 329 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Gm26028-201ENSMUST00000158660 294 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Gm26337-201ENSMUST00000178000 79 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Gm45031-201ENSMUST00000206800 288 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Gm45907-201ENSMUST00000213023 193 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Gm18441-201ENSMUST00000223539 617 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 AC123533.1-201ENSMUST00000227782 446 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Gm25698-201ENSMUST00000082897 107 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Gm26165-201ENSMUST00000083791 138 ntBASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Sh3rf1Q69ZI1 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Gm42659-201ENSMUST00000196955 1754 ntBASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Gm11204-201ENSMUST00000122438 147 ntBASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Gm23642-201ENSMUST00000157858 258 ntBASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Gm22156-201ENSMUST00000158409 141 ntBASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Gm24885-201ENSMUST00000158783 270 ntBASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Gm8790-201ENSMUST00000194108 322 ntBASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Gm42526-201ENSMUST00000198956 393 ntBASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 AC123803.1-201ENSMUST00000216093 189 ntBASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Sh3rf1Q69ZI1 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm22936-201ENSMUST00000103955 126 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm25421-201ENSMUST00000104218 164 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm12550-201ENSMUST00000118478 329 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm13273-201ENSMUST00000119737 159 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm23466-201ENSMUST00000157133 106 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm25716-201ENSMUST00000158628 104 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm24224-201ENSMUST00000158828 258 ntBASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Sh3rf1Q69ZI1 Gm24084-201ENSMUST00000175173 137 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms