Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC4.09□□□□□ -1.75
Trim28Q62318 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.09□□□□□ -1.75
Trim28Q62318 Gm22538-201ENSMUST00000158169 299 ntBASIC4.09□□□□□ -1.75
Trim28Q62318 Gm22263-201ENSMUST00000180060 104 ntBASIC4.09□□□□□ -1.75
Trim28Q62318 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC4.09□□□□□ -1.75
Trim28Q62318 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC4.09□□□□□ -1.75
Trim28Q62318 Gm29602-201ENSMUST00000186887 442 ntBASIC4.09□□□□□ -1.75
Trim28Q62318 Gm29350-201ENSMUST00000189141 541 ntBASIC4.09□□□□□ -1.75
Trim28Q62318 Gm38044-201ENSMUST00000192964 487 ntBASIC4.09□□□□□ -1.75
Trim28Q62318 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.09□□□□□ -1.75
Trim28Q62318 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC4.09□□□□□ -1.75
Trim28Q62318 Gm44393-201ENSMUST00000197418 138 ntBASIC4.09□□□□□ -1.75
Trim28Q62318 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC4.09□□□□□ -1.75
Trim28Q62318 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.09□□□□□ -1.75
Trim28Q62318 AC158606.1-201ENSMUST00000220078 325 ntBASIC4.09□□□□□ -1.75
Trim28Q62318 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC4.09□□□□□ -1.75
Trim28Q62318 Gm23055-201ENSMUST00000082805 94 ntBASIC4.09□□□□□ -1.75
Trim28Q62318 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Trim28Q62318 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
Trim28Q62318 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
Trim28Q62318 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Trim28Q62318 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Trim28Q62318 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim28Q62318 Gm24951-201ENSMUST00000102182 109 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 Gm22939-201ENSMUST00000103958 131 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 Gm13504-201ENSMUST00000117490 316 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 Gm8217-201ENSMUST00000119136 465 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim28Q62318 Gm26412-201ENSMUST00000157666 55 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 Gm24750-201ENSMUST00000157843 104 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 Gm23262-201ENSMUST00000158323 168 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 Gm24577-201ENSMUST00000158580 63 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 Gm23704-201ENSMUST00000158844 340 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 Gm24464-201ENSMUST00000179697 107 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim28Q62318 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim28Q62318 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
Trim28Q62318 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC4.08□□□□□ -1.76
Trim28Q62318 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.08□□□□□ -1.76
Trim28Q62318 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Trim28Q62318 Gm30534-201ENSMUST00000217928 207 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim28Q62318 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 AC124746.2-201ENSMUST00000226594 427 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trim28Q62318 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim28Q62318 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trim28Q62318 Gm23848-201ENSMUST00000083826 106 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim28Q62318 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trim28Q62318 AC154386.1-201ENSMUST00000222753 2871 ntBASIC4.08□□□□□ -1.76
Trim28Q62318 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim28Q62318 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trim28Q62318 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Trim28Q62318 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Trim28Q62318 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trim28Q62318 Gm25560-201ENSMUST00000104606 176 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm14823-201ENSMUST00000117698 238 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm12509-201ENSMUST00000118033 609 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm26027-201ENSMUST00000122725 268 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm23829-201ENSMUST00000157392 270 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm24213-201ENSMUST00000158255 258 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Mir6355-201ENSMUST00000183687 106 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm29512-201ENSMUST00000185544 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28110-201ENSMUST00000185782 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28838-201ENSMUST00000186338 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm29057-201ENSMUST00000186468 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm29661-201ENSMUST00000186781 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28737-201ENSMUST00000186808 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm29118-201ENSMUST00000186908 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28433-201ENSMUST00000187085 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm29635-201ENSMUST00000187221 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28759-201ENSMUST00000187621 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28831-201ENSMUST00000187739 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28200-201ENSMUST00000187778 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm29026-201ENSMUST00000187787 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28752-201ENSMUST00000188340 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28797-201ENSMUST00000188543 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28855-201ENSMUST00000188680 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm29378-201ENSMUST00000188723 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28569-201ENSMUST00000188748 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28120-201ENSMUST00000188812 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28369-201ENSMUST00000188993 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm29037-201ENSMUST00000189092 313 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28909-201ENSMUST00000189406 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28705-201ENSMUST00000189548 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28861-201ENSMUST00000189681 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm29180-201ENSMUST00000190003 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28939-201ENSMUST00000190351 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm28223-201ENSMUST00000190469 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm29575-201ENSMUST00000190597 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm29092-201ENSMUST00000190768 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm29469-201ENSMUST00000191448 315 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm7871-201ENSMUST00000195346 618 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm5175-202ENSMUST00000219699 529 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Snord14e-201ENSMUST00000082857 90 ntBASIC4.07□□□□□ -1.76
Trim28Q62318 Gm26128-201ENSMUST00000083170 110 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms