Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm43865-201ENSMUST00000204721 127 ntBASIC1.69□□□□□ -2.14
Trav3-3Q5R1C3 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC1.69□□□□□ -2.14
Trav3-3Q5R1C3 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.69□□□□□ -2.14
Trav3-3Q5R1C3 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Trav3-3Q5R1C3 Gm22622-201ENSMUST00000082870 129 ntBASIC1.69□□□□□ -2.14
Trav3-3Q5R1C3 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Trav3-3Q5R1C3 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Trav3-3Q5R1C3 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.69□□□□□ -2.14
Trav3-3Q5R1C3 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Mdga2-203ENSMUST00000113942 423 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm15896-201ENSMUST00000118045 440 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm12235-201ENSMUST00000118596 170 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm14835-201ENSMUST00000119039 315 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm23713-201ENSMUST00000157353 70 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm23332-201ENSMUST00000157424 275 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm23668-201ENSMUST00000157465 111 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm22615-201ENSMUST00000158102 70 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm24900-201ENSMUST00000158128 134 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm42672-201ENSMUST00000197821 352 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm44182-201ENSMUST00000204052 115 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm44794-201ENSMUST00000206550 411 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm18703-201ENSMUST00000215318 333 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm23454-201ENSMUST00000083332 133 ntBASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
Trav3-3Q5R1C3 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm15211-201ENSMUST00000118932 528 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm13862-201ENSMUST00000121220 197 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm12872-201ENSMUST00000121835 320 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm25153-201ENSMUST00000157118 156 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm25910-201ENSMUST00000157620 140 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm22517-201ENSMUST00000158265 136 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm23005-201ENSMUST00000158950 136 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm17187-201ENSMUST00000164622 410 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm25528-201ENSMUST00000180264 132 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm29335-201ENSMUST00000188361 459 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm43264-201ENSMUST00000202284 325 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm29809-201ENSMUST00000218423 493 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm9318-201ENSMUST00000222444 438 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 CT030704.1-201ENSMUST00000227521 699 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm22508-201ENSMUST00000082772 110 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gm45872-201ENSMUST00000209804 1584 ntBASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Trav3-3Q5R1C3 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm14973-201ENSMUST00000117248 255 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm13903-201ENSMUST00000120945 193 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm6568-201ENSMUST00000122274 697 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm25784-201ENSMUST00000122524 81 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm23206-201ENSMUST00000122720 184 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm22038-201ENSMUST00000157277 242 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm24439-201ENSMUST00000157894 117 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm24958-201ENSMUST00000158009 97 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm26173-201ENSMUST00000158416 136 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm27028-201ENSMUST00000182303 399 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm27505-201ENSMUST00000185071 110 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm28560-201ENSMUST00000186091 315 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm28334-201ENSMUST00000186653 315 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm29452-201ENSMUST00000187996 313 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm28860-201ENSMUST00000188103 313 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm28495-201ENSMUST00000188452 315 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm28232-201ENSMUST00000188683 315 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm28481-201ENSMUST00000189231 315 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm29059-201ENSMUST00000191534 315 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm37765-201ENSMUST00000192395 315 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm37237-201ENSMUST00000192893 315 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm37104-201ENSMUST00000193278 196 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm36968-201ENSMUST00000193737 315 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm38290-201ENSMUST00000195238 315 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm9236-201ENSMUST00000196892 587 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm3724-201ENSMUST00000197957 349 ntBASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.66□□□□□ -2.14
Trav3-3Q5R1C3 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms