Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm17538-201ENSMUST00000168236 327 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm25451-201ENSMUST00000177832 121 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm27659-201ENSMUST00000183472 98 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm28560-201ENSMUST00000186091 315 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm28334-201ENSMUST00000186653 315 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm28495-201ENSMUST00000188452 315 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm28232-201ENSMUST00000188683 315 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm28481-201ENSMUST00000189231 315 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm29059-201ENSMUST00000191534 315 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm37866-201ENSMUST00000191950 696 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm37765-201ENSMUST00000192395 315 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm37237-201ENSMUST00000192893 315 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm36968-201ENSMUST00000193737 315 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm38290-201ENSMUST00000195238 315 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm43582-201ENSMUST00000196149 343 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm43193-201ENSMUST00000197732 441 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm44903-201ENSMUST00000206840 130 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm44533-201ENSMUST00000207782 268 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 AC138667.2-201ENSMUST00000224880 598 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Gm22978-201ENSMUST00000082607 160 ntBASIC2.09□□□□□ -2.07
Trav8d-2Q5R1B6 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Trav8d-2Q5R1B6 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Trav8d-2Q5R1B6 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Gm24280-201ENSMUST00000104237 134 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Gm12191-201ENSMUST00000118307 348 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Gm9703-201ENSMUST00000119573 343 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Gm14428-201ENSMUST00000120408 822 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Gm22563-201ENSMUST00000157333 269 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Gm22818-201ENSMUST00000157446 104 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Gm22817-201ENSMUST00000157448 356 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Gm22716-201ENSMUST00000177596 107 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Gm37029-201ENSMUST00000195773 239 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Gm43402-201ENSMUST00000197159 159 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Gm45101-201ENSMUST00000208327 232 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav8d-2Q5R1B6 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm22713-201ENSMUST00000116895 130 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm11845-201ENSMUST00000117886 327 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm14007-201ENSMUST00000118288 210 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm14652-201ENSMUST00000118479 235 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm16428-201ENSMUST00000121193 723 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm24911-201ENSMUST00000157292 136 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm26345-201ENSMUST00000157534 120 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm25220-201ENSMUST00000157546 95 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm24436-201ENSMUST00000157889 302 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm24076-201ENSMUST00000158179 94 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm8292-201ENSMUST00000162574 396 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm27245-201ENSMUST00000184385 376 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm5116-201ENSMUST00000187732 463 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm29627-201ENSMUST00000187984 463 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm36984-201ENSMUST00000192770 235 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm44060-201ENSMUST00000204440 410 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm17991-201ENSMUST00000208139 297 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm44555-201ENSMUST00000209008 148 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.07□□□□□ -2.08
Trav8d-2Q5R1B6 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Gm6954-201ENSMUST00000117416 225 ntBASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Gm13876-201ENSMUST00000118451 261 ntBASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 AA413626-201ENSMUST00000121125 494 ntBASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Gm25945-201ENSMUST00000122484 135 ntBASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Gm23206-201ENSMUST00000122720 184 ntBASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Gm7592-201ENSMUST00000160674 627 ntBASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Gm9071-201ENSMUST00000165915 474 ntBASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Gm24813-201ENSMUST00000175310 84 ntBASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Gm23933-201ENSMUST00000178405 79 ntBASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.06□□□□□ -2.08
Trav8d-2Q5R1B6 Gm29817-201ENSMUST00000210098 172 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms