Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm23355-201ENSMUST00000177614 107 ntBASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 Gm23571-201ENSMUST00000180073 127 ntBASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 Gm23148-201ENSMUST00000180367 107 ntBASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 Gm42451-201ENSMUST00000197410 244 ntBASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 Gm35702-201ENSMUST00000198653 511 ntBASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 Gm43991-201ENSMUST00000203751 274 ntBASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 AL590503.1-201ENSMUST00000222053 321 ntBASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 AC164304.1-201ENSMUST00000226920 272 ntBASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 Gm10813-201ENSMUST00000099936 90 ntBASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.22□□□□□ -1.73
Rnf43Q5NCP0 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
Rnf43Q5NCP0 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm37236-201ENSMUST00000193670 3249 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm6829-201ENSMUST00000119858 360 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm14770-201ENSMUST00000122197 312 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 n-R5s216-201ENSMUST00000122755 112 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm24392-201ENSMUST00000158136 103 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm22766-201ENSMUST00000158372 99 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm22135-201ENSMUST00000158752 108 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm24667-201ENSMUST00000158938 103 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm7241-201ENSMUST00000159853 357 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Mir466b-1-201ENSMUST00000177988 82 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm29408-201ENSMUST00000187536 216 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm1833-201ENSMUST00000191608 682 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm37713-201ENSMUST00000191746 198 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 CT485607.2-201ENSMUST00000214650 91 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 AC124739.2-201ENSMUST00000222201 109 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm24705-201ENSMUST00000082808 107 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm26456-201ENSMUST00000082831 111 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm23095-201ENSMUST00000083446 107 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm22868-201ENSMUST00000083955 164 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.21□□□□□ -1.74
Rnf43Q5NCP0 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Gm26418-201ENSMUST00000104275 137 ntBASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Gm24982-201ENSMUST00000104456 132 ntBASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Gm14119-201ENSMUST00000119511 235 ntBASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Gm14586-201ENSMUST00000119571 408 ntBASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Gm14810-201ENSMUST00000121628 486 ntBASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Gm22378-201ENSMUST00000157481 111 ntBASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Gm26983-201ENSMUST00000182051 388 ntBASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Gm28849-201ENSMUST00000188127 174 ntBASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Gm28330-201ENSMUST00000190353 171 ntBASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Gm18429-201ENSMUST00000198707 421 ntBASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Gm6615-201ENSMUST00000199426 631 ntBASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Gm25204-201ENSMUST00000082843 106 ntBASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Rnf43Q5NCP0 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm12458-201ENSMUST00000119387 495 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm13581-201ENSMUST00000120675 278 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm26026-201ENSMUST00000122726 123 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm25392-201ENSMUST00000157335 297 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm26148-201ENSMUST00000157430 68 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm25572-201ENSMUST00000157527 172 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm25220-201ENSMUST00000157546 95 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm18520-201ENSMUST00000174783 658 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Gm24304-201ENSMUST00000177635 107 ntBASIC4.19□□□□□ -1.74
Rnf43Q5NCP0 Mir669k-201ENSMUST00000177742 127 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms