Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm5391-201ENSMUST00000121155 613 ntBASIC4.83□□□□□ -1.64
Col9a1Q05722 Gm24251-201ENSMUST00000157324 114 ntBASIC4.83□□□□□ -1.64
Col9a1Q05722 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col9a1Q05722 Gm2389-201ENSMUST00000160487 189 ntBASIC4.83□□□□□ -1.64
Col9a1Q05722 Mir6399-201ENSMUST00000184050 84 ntBASIC4.83□□□□□ -1.64
Col9a1Q05722 Gm37116-201ENSMUST00000195161 147 ntBASIC4.83□□□□□ -1.64
Col9a1Q05722 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.83□□□□□ -1.64
Col9a1Q05722 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col9a1Q05722 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.83□□□□□ -1.64
Col9a1Q05722 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col9a1Q05722 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col9a1Q05722 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Col9a1Q05722 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Col9a1Q05722 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col9a1Q05722 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.83□□□□□ -1.64
Col9a1Q05722 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col9a1Q05722 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col9a1Q05722 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col9a1Q05722 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col9a1Q05722 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col9a1Q05722 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col9a1Q05722 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col9a1Q05722 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col9a1Q05722 Gm12760-201ENSMUST00000117861 482 ntBASIC4.82□□□□□ -1.64
Col9a1Q05722 Gm23080-201ENSMUST00000157846 103 ntBASIC4.82□□□□□ -1.64
Col9a1Q05722 Gm22890-201ENSMUST00000158642 144 ntBASIC4.82□□□□□ -1.64
Col9a1Q05722 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.82□□□□□ -1.64
Col9a1Q05722 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.82□□□□□ -1.64
Col9a1Q05722 Gm15235-201ENSMUST00000200572 194 ntBASIC4.82□□□□□ -1.64
Col9a1Q05722 Gm44824-201ENSMUST00000207021 229 ntBASIC4.82□□□□□ -1.64
Col9a1Q05722 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC4.82□□□□□ -1.64
Col9a1Q05722 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.82□□□□□ -1.64
Col9a1Q05722 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col9a1Q05722 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Col9a1Q05722 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col9a1Q05722 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col9a1Q05722 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.82□□□□□ -1.64
Col9a1Q05722 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col9a1Q05722 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Col9a1Q05722 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col9a1Q05722 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col9a1Q05722 Smc5-206ENSMUST00000226111 3265 ntBASIC4.82□□□□□ -1.64
Col9a1Q05722 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
Col9a1Q05722 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.82□□□□□ -1.64
Col9a1Q05722 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col9a1Q05722 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col9a1Q05722 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col9a1Q05722 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col9a1Q05722 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.81□□□□□ -1.64
Col9a1Q05722 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC4.81□□□□□ -1.64
Col9a1Q05722 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC4.81□□□□□ -1.64
Col9a1Q05722 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col9a1Q05722 Gm26160-201ENSMUST00000158965 63 ntBASIC4.81□□□□□ -1.64
Col9a1Q05722 Gm25253-201ENSMUST00000179958 107 ntBASIC4.81□□□□□ -1.64
Col9a1Q05722 Gm27883-201ENSMUST00000183941 102 ntBASIC4.81□□□□□ -1.64
Col9a1Q05722 Gm28825-201ENSMUST00000186233 238 ntBASIC4.81□□□□□ -1.64
Col9a1Q05722 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC4.81□□□□□ -1.64
Col9a1Q05722 Trbv18-201ENSMUST00000194256 294 ntBASIC4.81□□□□□ -1.64
Col9a1Q05722 Gm23370-202ENSMUST00000197008 129 ntBASIC4.81□□□□□ -1.64
Col9a1Q05722 Gm44524-201ENSMUST00000203899 271 ntBASIC4.81□□□□□ -1.64
Col9a1Q05722 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC4.81□□□□□ -1.64
Col9a1Q05722 Mir20a-201ENSMUST00000083508 107 ntBASIC4.81□□□□□ -1.64
Col9a1Q05722 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col9a1Q05722 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col9a1Q05722 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col9a1Q05722 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col9a1Q05722 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Col9a1Q05722 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col9a1Q05722 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col9a1Q05722 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col9a1Q05722 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col9a1Q05722 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col9a1Q05722 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col9a1Q05722 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col9a1Q05722 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col9a1Q05722 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col9a1Q05722 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
Col9a1Q05722 Gm45179-201ENSMUST00000208452 4337 ntBASIC4.8□□□□□ -1.64
Col9a1Q05722 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col9a1Q05722 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Col9a1Q05722 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Col9a1Q05722 Gm25623-201ENSMUST00000157216 108 ntBASIC4.8□□□□□ -1.64
Col9a1Q05722 Gm23230-201ENSMUST00000157298 133 ntBASIC4.8□□□□□ -1.64
Col9a1Q05722 Gm22586-201ENSMUST00000157507 122 ntBASIC4.8□□□□□ -1.64
Col9a1Q05722 Gm24507-201ENSMUST00000157683 134 ntBASIC4.8□□□□□ -1.64
Col9a1Q05722 Gm26084-201ENSMUST00000157903 104 ntBASIC4.8□□□□□ -1.64
Col9a1Q05722 Gm26360-201ENSMUST00000158872 103 ntBASIC4.8□□□□□ -1.64
Col9a1Q05722 Gm23504-201ENSMUST00000158988 95 ntBASIC4.8□□□□□ -1.64
Col9a1Q05722 Gm27688-201ENSMUST00000183634 91 ntBASIC4.8□□□□□ -1.64
Col9a1Q05722 Gm44308-201ENSMUST00000197080 99 ntBASIC4.8□□□□□ -1.64
Col9a1Q05722 Igkv1-136-201ENSMUST00000200635 297 ntBASIC4.8□□□□□ -1.64
Col9a1Q05722 Gm44600-201ENSMUST00000208540 111 ntBASIC4.8□□□□□ -1.64
Col9a1Q05722 AC124400.1-201ENSMUST00000225779 193 ntBASIC4.8□□□□□ -1.64
Col9a1Q05722 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC4.8□□□□□ -1.64
Col9a1Q05722 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
Col9a1Q05722 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col9a1Q05722 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col9a1Q05722 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col9a1Q05722 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.8□□□□□ -1.64
Col9a1Q05722 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms