Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scn1bP97952 Gm7946-201ENSMUST00000203326 958 ntBASIC2.58□□□□□ -2
Scn1bP97952 Gm44870-201ENSMUST00000207291 357 ntBASIC2.58□□□□□ -2
Scn1bP97952 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.58□□□□□ -2
Scn1bP97952 AC129208.2-201ENSMUST00000228506 320 ntBASIC2.58□□□□□ -2
Scn1bP97952 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn1bP97952 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn1bP97952 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Scn1bP97952 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Scn1bP97952 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scn1bP97952 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scn1bP97952 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn1bP97952 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Scn1bP97952 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Scn1bP97952 Gm26473-201ENSMUST00000116763 127 ntBASIC2.57□□□□□ -2
Scn1bP97952 Gm22486-201ENSMUST00000116815 137 ntBASIC2.57□□□□□ -2
Scn1bP97952 Gm14770-201ENSMUST00000122197 312 ntBASIC2.57□□□□□ -2
Scn1bP97952 Gm12819-201ENSMUST00000122223 629 ntBASIC2.57□□□□□ -2
Scn1bP97952 Gm16355-201ENSMUST00000128606 231 ntBASIC2.57□□□□□ -2
Scn1bP97952 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC2.57□□□□□ -2
Scn1bP97952 Gm23586-201ENSMUST00000157657 123 ntBASIC2.57□□□□□ -2
Scn1bP97952 Gm24190-201ENSMUST00000157976 216 ntBASIC2.57□□□□□ -2
Scn1bP97952 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.57□□□□□ -2
Scn1bP97952 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC2.57□□□□□ -2
Scn1bP97952 Gm29231-201ENSMUST00000179850 319 ntBASIC2.57□□□□□ -2
Scn1bP97952 Gm26652-202ENSMUST00000181672 475 ntBASIC2.57□□□□□ -2
Scn1bP97952 Gm27313-201ENSMUST00000183500 142 ntBASIC2.57□□□□□ -2
Scn1bP97952 Gm29597-201ENSMUST00000188035 308 ntBASIC2.57□□□□□ -2
Scn1bP97952 Gm38311-201ENSMUST00000192945 165 ntBASIC2.57□□□□□ -2
Scn1bP97952 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC2.57□□□□□ -2
Scn1bP97952 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.57□□□□□ -2
Scn1bP97952 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.57□□□□□ -2
Scn1bP97952 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC2.57□□□□□ -2
Scn1bP97952 Gm18854-201ENSMUST00000211196 329 ntBASIC2.57□□□□□ -2
Scn1bP97952 Gm19118-201ENSMUST00000222554 98 ntBASIC2.57□□□□□ -2
Scn1bP97952 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.57□□□□□ -2
Scn1bP97952 Gm9762-201ENSMUST00000036976 444 ntBASIC2.57□□□□□ -2
Scn1bP97952 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Scn1bP97952 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Scn1bP97952 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.56□□□□□ -2
Scn1bP97952 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
Scn1bP97952 Gm24582-201ENSMUST00000103967 103 ntBASIC2.56□□□□□ -2
Scn1bP97952 Gm24280-201ENSMUST00000104237 134 ntBASIC2.56□□□□□ -2
Scn1bP97952 Gm12872-201ENSMUST00000121835 320 ntBASIC2.56□□□□□ -2
Scn1bP97952 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.56□□□□□ -2
Scn1bP97952 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.56□□□□□ -2
Scn1bP97952 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.56□□□□□ -2
Scn1bP97952 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.56□□□□□ -2
Scn1bP97952 Gm22555-201ENSMUST00000157801 62 ntBASIC2.56□□□□□ -2
Scn1bP97952 Gm22389-201ENSMUST00000158193 301 ntBASIC2.56□□□□□ -2
Scn1bP97952 Gm43405-201ENSMUST00000198642 337 ntBASIC2.56□□□□□ -2
Scn1bP97952 Gm25203-202ENSMUST00000200458 216 ntBASIC2.56□□□□□ -2
Scn1bP97952 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.56□□□□□ -2
Scn1bP97952 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.56□□□□□ -2
Scn1bP97952 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.56□□□□□ -2
Scn1bP97952 Gm25203-201ENSMUST00000082842 215 ntBASIC2.56□□□□□ -2
Scn1bP97952 Gm22577-201ENSMUST00000083731 109 ntBASIC2.56□□□□□ -2
Scn1bP97952 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Scn1bP97952 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Scn1bP97952 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
Scn1bP97952 Mir499-201ENSMUST00000102357 79 ntBASIC2.55□□□□□ -2
Scn1bP97952 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Scn1bP97952 Gm13331-201ENSMUST00000117500 448 ntBASIC2.55□□□□□ -2
Scn1bP97952 Gm12787-201ENSMUST00000119234 396 ntBASIC2.55□□□□□ -2
Scn1bP97952 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.55□□□□□ -2
Scn1bP97952 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.55□□□□□ -2
Scn1bP97952 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.55□□□□□ -2
Scn1bP97952 Gm23000-201ENSMUST00000157083 139 ntBASIC2.55□□□□□ -2
Scn1bP97952 Gm23667-201ENSMUST00000157466 120 ntBASIC2.55□□□□□ -2
Scn1bP97952 Gm24553-201ENSMUST00000158653 131 ntBASIC2.55□□□□□ -2
Scn1bP97952 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.55□□□□□ -2
Scn1bP97952 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Scn1bP97952 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Scn1bP97952 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.55□□□□□ -2
Scn1bP97952 Gm24862-201ENSMUST00000179103 79 ntBASIC2.55□□□□□ -2
Scn1bP97952 Gm23310-201ENSMUST00000179105 79 ntBASIC2.55□□□□□ -2
Scn1bP97952 Gm25461-201ENSMUST00000179293 79 ntBASIC2.55□□□□□ -2
Scn1bP97952 Gm21729-201ENSMUST00000180058 664 ntBASIC2.55□□□□□ -2
Scn1bP97952 Gm21853-201ENSMUST00000180071 664 ntBASIC2.55□□□□□ -2
Scn1bP97952 Mir6926-201ENSMUST00000184562 68 ntBASIC2.55□□□□□ -2
Scn1bP97952 Gm29350-201ENSMUST00000189141 541 ntBASIC2.55□□□□□ -2
Scn1bP97952 Gm29495-201ENSMUST00000189319 664 ntBASIC2.55□□□□□ -2
Scn1bP97952 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.55□□□□□ -2
Scn1bP97952 Gm9377-201ENSMUST00000207227 623 ntBASIC2.55□□□□□ -2
Scn1bP97952 AC120394.1-201ENSMUST00000217153 351 ntBASIC2.55□□□□□ -2
Scn1bP97952 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.55□□□□□ -2
Scn1bP97952 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Scn1bP97952 Gm25475-201ENSMUST00000082825 180 ntBASIC2.55□□□□□ -2
Scn1bP97952 Gm23040-201ENSMUST00000083869 163 ntBASIC2.55□□□□□ -2
Scn1bP97952 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Scn1bP97952 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Scn1bP97952 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Scn1bP97952 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.54□□□□□ -2
Scn1bP97952 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Scn1bP97952 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Scn1bP97952 Gm14823-201ENSMUST00000117698 238 ntBASIC2.54□□□□□ -2
Scn1bP97952 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.54□□□□□ -2
Scn1bP97952 Gm23325-201ENSMUST00000157422 129 ntBASIC2.54□□□□□ -2
Scn1bP97952 Gm24780-201ENSMUST00000157635 143 ntBASIC2.54□□□□□ -2
Scn1bP97952 Gm24730-201ENSMUST00000158228 117 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms