Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC2.88□□□□□ -1.95
NcanP55066 Gm24464-201ENSMUST00000179697 107 ntBASIC2.88□□□□□ -1.95
NcanP55066 Gm11395-201ENSMUST00000181011 499 ntBASIC2.88□□□□□ -1.95
NcanP55066 Gm27313-201ENSMUST00000183500 142 ntBASIC2.88□□□□□ -1.95
NcanP55066 Gm28744-201ENSMUST00000189939 340 ntBASIC2.88□□□□□ -1.95
NcanP55066 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NcanP55066 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.88□□□□□ -1.95
NcanP55066 Gm29848-201ENSMUST00000203107 295 ntBASIC2.88□□□□□ -1.95
NcanP55066 Gm45296-201ENSMUST00000209625 205 ntBASIC2.88□□□□□ -1.95
NcanP55066 Gm45654-201ENSMUST00000210980 123 ntBASIC2.88□□□□□ -1.95
NcanP55066 LOC667541-201ENSMUST00000223408 278 ntBASIC2.88□□□□□ -1.95
NcanP55066 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NcanP55066 Gm23741-201ENSMUST00000097237 171 ntBASIC2.88□□□□□ -1.95
NcanP55066 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
NcanP55066 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
NcanP55066 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
NcanP55066 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NcanP55066 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
NcanP55066 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NcanP55066 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.87□□□□□ -1.95
NcanP55066 Gm12803-201ENSMUST00000118907 821 ntBASIC2.87□□□□□ -1.95
NcanP55066 Gm12053-201ENSMUST00000119022 252 ntBASIC2.87□□□□□ -1.95
NcanP55066 Gm11785-201ENSMUST00000120165 601 ntBASIC2.87□□□□□ -1.95
NcanP55066 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
NcanP55066 Gm11522-201ENSMUST00000120533 176 ntBASIC2.87□□□□□ -1.95
NcanP55066 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.87□□□□□ -1.95
NcanP55066 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.87□□□□□ -1.95
NcanP55066 Gm18588-201ENSMUST00000177308 492 ntBASIC2.87□□□□□ -1.95
NcanP55066 Gm21729-201ENSMUST00000180058 664 ntBASIC2.87□□□□□ -1.95
NcanP55066 Gm21853-201ENSMUST00000180071 664 ntBASIC2.87□□□□□ -1.95
NcanP55066 Gm23144-201ENSMUST00000180226 107 ntBASIC2.87□□□□□ -1.95
NcanP55066 Gm29216-201ENSMUST00000187117 492 ntBASIC2.87□□□□□ -1.95
NcanP55066 Gm29495-201ENSMUST00000189319 664 ntBASIC2.87□□□□□ -1.95
NcanP55066 Gm28299-201ENSMUST00000189908 339 ntBASIC2.87□□□□□ -1.95
NcanP55066 Gm18774-201ENSMUST00000218269 601 ntBASIC2.87□□□□□ -1.95
NcanP55066 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.87□□□□□ -1.95
NcanP55066 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.87□□□□□ -1.95
NcanP55066 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.87□□□□□ -1.95
NcanP55066 Gm24268-201ENSMUST00000082990 110 ntBASIC2.87□□□□□ -1.95
NcanP55066 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
NcanP55066 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
NcanP55066 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
NcanP55066 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
NcanP55066 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NcanP55066 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NcanP55066 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
NcanP55066 Mir693-201ENSMUST00000102187 89 ntBASIC2.86□□□□□ -1.95
NcanP55066 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.86□□□□□ -1.95
NcanP55066 Gm26077-201ENSMUST00000104064 123 ntBASIC2.86□□□□□ -1.95
NcanP55066 Gm15714-201ENSMUST00000117168 250 ntBASIC2.86□□□□□ -1.95
NcanP55066 Gm11384-201ENSMUST00000121376 303 ntBASIC2.86□□□□□ -1.95
NcanP55066 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.86□□□□□ -1.95
NcanP55066 Gm16354-201ENSMUST00000155376 150 ntBASIC2.86□□□□□ -1.95
NcanP55066 Gm25283-201ENSMUST00000157272 77 ntBASIC2.86□□□□□ -1.95
NcanP55066 Gm24076-201ENSMUST00000158179 94 ntBASIC2.86□□□□□ -1.95
NcanP55066 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.86□□□□□ -1.95
NcanP55066 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NcanP55066 Gm8151-201ENSMUST00000184817 871 ntBASIC2.86□□□□□ -1.95
NcanP55066 Gm10193-201ENSMUST00000188288 231 ntBASIC2.86□□□□□ -1.95
NcanP55066 Gm29335-201ENSMUST00000188361 459 ntBASIC2.86□□□□□ -1.95
NcanP55066 Trbv24-201ENSMUST00000194614 347 ntBASIC2.86□□□□□ -1.95
NcanP55066 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.86□□□□□ -1.95
NcanP55066 Gm43367-201ENSMUST00000199986 625 ntBASIC2.86□□□□□ -1.95
NcanP55066 Gm44961-201ENSMUST00000207450 196 ntBASIC2.86□□□□□ -1.95
NcanP55066 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.86□□□□□ -1.95
NcanP55066 Gm45879-201ENSMUST00000212521 392 ntBASIC2.86□□□□□ -1.95
NcanP55066 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.86□□□□□ -1.95
NcanP55066 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC2.86□□□□□ -1.95
NcanP55066 CT025526.1-201ENSMUST00000217327 267 ntBASIC2.86□□□□□ -1.95
NcanP55066 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
NcanP55066 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
NcanP55066 Gm23850-201ENSMUST00000083830 169 ntBASIC2.86□□□□□ -1.95
NcanP55066 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
NcanP55066 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.86□□□□□ -1.95
NcanP55066 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NcanP55066 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
NcanP55066 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
NcanP55066 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NcanP55066 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
NcanP55066 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
NcanP55066 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.85□□□□□ -1.95
NcanP55066 Gm24890-201ENSMUST00000104389 102 ntBASIC2.85□□□□□ -1.95
NcanP55066 Gm7916-201ENSMUST00000120325 456 ntBASIC2.85□□□□□ -1.95
NcanP55066 Gm14804-201ENSMUST00000122322 508 ntBASIC2.85□□□□□ -1.95
NcanP55066 Gm25807-201ENSMUST00000122783 305 ntBASIC2.85□□□□□ -1.95
NcanP55066 Gm22755-201ENSMUST00000157143 100 ntBASIC2.85□□□□□ -1.95
NcanP55066 Gm21754-201ENSMUST00000177550 479 ntBASIC2.85□□□□□ -1.95
NcanP55066 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.85□□□□□ -1.95
NcanP55066 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.85□□□□□ -1.95
NcanP55066 Gm27700-201ENSMUST00000185003 81 ntBASIC2.85□□□□□ -1.95
NcanP55066 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.85□□□□□ -1.95
NcanP55066 Gm18964-201ENSMUST00000193013 563 ntBASIC2.85□□□□□ -1.95
NcanP55066 Gm37007-201ENSMUST00000194234 319 ntBASIC2.85□□□□□ -1.95
NcanP55066 Gm37119-201ENSMUST00000195691 389 ntBASIC2.85□□□□□ -1.95
NcanP55066 Gm42960-201ENSMUST00000202160 241 ntBASIC2.85□□□□□ -1.95
NcanP55066 Gm44161-201ENSMUST00000203532 253 ntBASIC2.85□□□□□ -1.95
NcanP55066 Gm45101-201ENSMUST00000208327 232 ntBASIC2.85□□□□□ -1.95
NcanP55066 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.85□□□□□ -1.95
NcanP55066 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NcanP55066 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms