Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm24439-201ENSMUST00000157894 117 ntBASIC2.32□□□□□ -2.04
Sox3P53784 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Sox3P53784 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Sox3P53784 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
Sox3P53784 Gm22131-201ENSMUST00000178415 94 ntBASIC2.32□□□□□ -2.04
Sox3P53784 Gm28299-201ENSMUST00000189908 339 ntBASIC2.32□□□□□ -2.04
Sox3P53784 Gm37029-201ENSMUST00000195773 239 ntBASIC2.32□□□□□ -2.04
Sox3P53784 Gm45150-201ENSMUST00000206051 467 ntBASIC2.32□□□□□ -2.04
Sox3P53784 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Sox3P53784 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.32□□□□□ -2.04
Sox3P53784 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.32□□□□□ -2.04
Sox3P53784 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Sox3P53784 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Sox3P53784 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Sox3P53784 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Sox3P53784 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Sox3P53784 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Sox3P53784 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Sox3P53784 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
Sox3P53784 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Sox3P53784 Gm22591-201ENSMUST00000104243 106 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Sox3P53784 Gm26473-201ENSMUST00000116763 127 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Gm14793-201ENSMUST00000118739 311 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Gm15266-201ENSMUST00000119635 255 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Gm11849-201ENSMUST00000121293 261 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Gm12956-201ENSMUST00000122184 414 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Sox3P53784 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.31□□□□□ -2.04
Sox3P53784 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Sox3P53784 Gm23600-201ENSMUST00000157260 71 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.31□□□□□ -2.04
Sox3P53784 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Gm23289-201ENSMUST00000175615 108 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Sox3P53784 Gm27898-201ENSMUST00000183987 80 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Gm27245-201ENSMUST00000184385 376 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Gm27755-201ENSMUST00000184623 132 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC2.31□□□□□ -2.04
Sox3P53784 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC2.31□□□□□ -2.04
Sox3P53784 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC2.31□□□□□ -2.04
Sox3P53784 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Gm8041-201ENSMUST00000199755 616 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Gm29848-201ENSMUST00000203107 295 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Gm44923-201ENSMUST00000206673 85 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Gm18453-201ENSMUST00000208000 626 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Gm22810-201ENSMUST00000082741 158 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.31□□□□□ -2.04
Sox3P53784 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Sox3P53784 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.31□□□□□ -2.04
Sox3P53784 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Sox3P53784 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Sox3P53784 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Sox3P53784 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Sox3P53784 Gm24126-201ENSMUST00000104111 106 ntBASIC2.3□□□□□ -2.04
Sox3P53784 Gm23010-201ENSMUST00000104151 126 ntBASIC2.3□□□□□ -2.04
Sox3P53784 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.3□□□□□ -2.04
Sox3P53784 Gm15106-201ENSMUST00000119691 821 ntBASIC2.3□□□□□ -2.04
Sox3P53784 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.3□□□□□ -2.04
Sox3P53784 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Sox3P53784 Gm22098-201ENSMUST00000157930 85 ntBASIC2.3□□□□□ -2.04
Sox3P53784 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Sox3P53784 Gm27028-201ENSMUST00000182303 399 ntBASIC2.3□□□□□ -2.04
Sox3P53784 Gm21673-201ENSMUST00000186640 436 ntBASIC2.3□□□□□ -2.04
Sox3P53784 Gm21135-201ENSMUST00000189023 436 ntBASIC2.3□□□□□ -2.04
Sox3P53784 Gm20915-201ENSMUST00000191575 663 ntBASIC2.3□□□□□ -2.04
Sox3P53784 Gm37579-201ENSMUST00000194291 142 ntBASIC2.3□□□□□ -2.04
Sox3P53784 Gm7871-201ENSMUST00000195346 618 ntBASIC2.3□□□□□ -2.04
Sox3P53784 Gm43722-201ENSMUST00000196054 124 ntBASIC2.3□□□□□ -2.04
Sox3P53784 Gm43284-201ENSMUST00000200103 253 ntBASIC2.3□□□□□ -2.04
Sox3P53784 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.3□□□□□ -2.04
Sox3P53784 Gm44472-201ENSMUST00000204922 943 ntBASIC2.3□□□□□ -2.04
Sox3P53784 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.3□□□□□ -2.04
Sox3P53784 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.3□□□□□ -2.04
Sox3P53784 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.3□□□□□ -2.04
Sox3P53784 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
Sox3P53784 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
Sox3P53784 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
Sox3P53784 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
Sox3P53784 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.29□□□□□ -2.04
Sox3P53784 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Sox3P53784 Gm22496-201ENSMUST00000104493 88 ntBASIC2.29□□□□□ -2.04
Sox3P53784 Gm13756-201ENSMUST00000117618 222 ntBASIC2.29□□□□□ -2.04
Sox3P53784 Gm12941-201ENSMUST00000117934 220 ntBASIC2.29□□□□□ -2.04
Sox3P53784 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.29□□□□□ -2.04
Sox3P53784 Gm23885-201ENSMUST00000122682 294 ntBASIC2.29□□□□□ -2.04
Sox3P53784 Gm15878-201ENSMUST00000127561 306 ntBASIC2.29□□□□□ -2.04
Sox3P53784 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.29□□□□□ -2.04
Sox3P53784 Gm23981-201ENSMUST00000157136 106 ntBASIC2.29□□□□□ -2.04
Sox3P53784 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Sox3P53784 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Sox3P53784 Gm18416-201ENSMUST00000175635 1003 ntBASIC2.29□□□□□ -2.04
Sox3P53784 Gm20794-201ENSMUST00000177626 628 ntBASIC2.29□□□□□ -2.04
Sox3P53784 Gm21744-201ENSMUST00000178403 662 ntBASIC2.29□□□□□ -2.04
Sox3P53784 Gm25175-201ENSMUST00000178712 79 ntBASIC2.29□□□□□ -2.04
Sox3P53784 Gm21171-201ENSMUST00000180048 673 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms