Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm11471-201ENSMUST00000121824 198 ntBASIC4.22□□□□□ -1.73
Sox1P53783 Gm22958-201ENSMUST00000122512 184 ntBASIC4.22□□□□□ -1.73
Sox1P53783 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.22□□□□□ -1.73
Sox1P53783 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.22□□□□□ -1.73
Sox1P53783 Gm16354-201ENSMUST00000155376 150 ntBASIC4.22□□□□□ -1.73
Sox1P53783 Gm22561-201ENSMUST00000157331 84 ntBASIC4.22□□□□□ -1.73
Sox1P53783 Gm22314-201ENSMUST00000158007 281 ntBASIC4.22□□□□□ -1.73
Sox1P53783 Gm19503-201ENSMUST00000187109 241 ntBASIC4.22□□□□□ -1.73
Sox1P53783 Gm37617-201ENSMUST00000194309 159 ntBASIC4.22□□□□□ -1.73
Sox1P53783 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Sox1P53783 Mir376a-201ENSMUST00000197584 68 ntBASIC4.22□□□□□ -1.73
Sox1P53783 Gm42990-201ENSMUST00000199231 312 ntBASIC4.22□□□□□ -1.73
Sox1P53783 Gm36776-201ENSMUST00000207006 203 ntBASIC4.22□□□□□ -1.73
Sox1P53783 AC188459.1-201ENSMUST00000216651 300 ntBASIC4.22□□□□□ -1.73
Sox1P53783 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.22□□□□□ -1.73
Sox1P53783 Gm25134-201ENSMUST00000082646 160 ntBASIC4.22□□□□□ -1.73
Sox1P53783 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sox1P53783 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sox1P53783 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Sox1P53783 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.21□□□□□ -1.73
Sox1P53783 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Sox1P53783 Gm23746-201ENSMUST00000104229 125 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Gm11982-201ENSMUST00000121480 314 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC4.21□□□□□ -1.74
Sox1P53783 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC4.21□□□□□ -1.74
Sox1P53783 Gm23540-201ENSMUST00000157543 164 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Gm25223-201ENSMUST00000158200 110 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Gm25015-201ENSMUST00000158400 128 ntBASIC4.21□□□□□ -1.74
Sox1P53783 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Sox1P53783 Gm21827-201ENSMUST00000178247 423 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Gm7909-201ENSMUST00000182688 614 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Gm29022-201ENSMUST00000190702 225 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Gm30341-201ENSMUST00000194363 289 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Gm26379-202ENSMUST00000200225 132 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Gm43424-201ENSMUST00000200484 253 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Gm20144-201ENSMUST00000203031 165 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Gm5002-201ENSMUST00000207145 223 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.21□□□□□ -1.74
Sox1P53783 Gm7065-201ENSMUST00000222150 474 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Gm3829-201ENSMUST00000222362 619 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Gm7117-201ENSMUST00000071515 387 ntBASIC4.21□□□□□ -1.74
Sox1P53783 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Sox1P53783 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Sox1P53783 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Sox1P53783 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Sox1P53783 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Sox1P53783 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Sox1P53783 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sox1P53783 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sox1P53783 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Sox1P53783 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sox1P53783 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Sox1P53783 Snord19-201ENSMUST00000104609 76 ntBASIC4.2□□□□□ -1.74
Sox1P53783 Gm15896-201ENSMUST00000118045 440 ntBASIC4.2□□□□□ -1.74
Sox1P53783 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Sox1P53783 Gm23982-201ENSMUST00000157141 106 ntBASIC4.2□□□□□ -1.74
Sox1P53783 Gm23902-201ENSMUST00000157571 134 ntBASIC4.2□□□□□ -1.74
Sox1P53783 Gm22601-201ENSMUST00000157595 250 ntBASIC4.2□□□□□ -1.74
Sox1P53783 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.2□□□□□ -1.74
Sox1P53783 Gm28660-201ENSMUST00000186496 253 ntBASIC4.2□□□□□ -1.74
Sox1P53783 Gm38332-201ENSMUST00000194189 147 ntBASIC4.2□□□□□ -1.74
Sox1P53783 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC4.2□□□□□ -1.74
Sox1P53783 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Sox1P53783 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sox1P53783 Mir34b-201ENSMUST00000083558 84 ntBASIC4.2□□□□□ -1.74
Sox1P53783 Mir101b-201ENSMUST00000083622 97 ntBASIC4.2□□□□□ -1.74
Sox1P53783 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sox1P53783 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sox1P53783 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sox1P53783 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sox1P53783 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Sox1P53783 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Sox1P53783 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Sox1P53783 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Sox1P53783 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.2□□□□□ -1.74
Sox1P53783 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Sox1P53783 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.19□□□□□ -1.74
Sox1P53783 AC153526.2-201ENSMUST00000218206 2031 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Sox1P53783 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Sox1P53783 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Sox1P53783 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Sox1P53783 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Sox1P53783 Gm26026-201ENSMUST00000122726 123 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Gm26347-201ENSMUST00000157526 131 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Gm24138-201ENSMUST00000157572 114 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Gm25914-201ENSMUST00000157618 153 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Gm25863-201ENSMUST00000158249 329 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Gm24636-201ENSMUST00000158673 288 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Gm7241-201ENSMUST00000159853 357 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Gm20450-201ENSMUST00000173652 147 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Gm24799-201ENSMUST00000178431 79 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Mir6383-201ENSMUST00000184545 116 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Mir8090-201ENSMUST00000185078 136 ntBASIC4.19□□□□□ -1.74
Sox1P53783 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms