Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.55□□□□□ -2.16
Cux1P53564 Gm45268-201ENSMUST00000210046 370 ntBASIC1.55□□□□□ -2.16
Cux1P53564 Gm23975-201ENSMUST00000082685 106 ntBASIC1.55□□□□□ -2.16
Cux1P53564 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Cux1P53564 Gm23126-201ENSMUST00000104260 134 ntBASIC1.54□□□□□ -2.16
Cux1P53564 Gm12392-201ENSMUST00000118014 938 ntBASIC1.54□□□□□ -2.16
Cux1P53564 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC1.54□□□□□ -2.16
Cux1P53564 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC1.54□□□□□ -2.16
Cux1P53564 Mir5101-201ENSMUST00000175181 83 ntBASIC1.54□□□□□ -2.16
Cux1P53564 Gm25944-201ENSMUST00000178758 94 ntBASIC1.54□□□□□ -2.16
Cux1P53564 Gm27599-201ENSMUST00000183758 174 ntBASIC1.54□□□□□ -2.16
Cux1P53564 Mir6380-201ENSMUST00000184334 81 ntBASIC1.54□□□□□ -2.16
Cux1P53564 Gm43043-201ENSMUST00000196579 412 ntBASIC1.54□□□□□ -2.16
Cux1P53564 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.54□□□□□ -2.16
Cux1P53564 Gm45173-201ENSMUST00000206819 305 ntBASIC1.54□□□□□ -2.16
Cux1P53564 AC159246.1-201ENSMUST00000214478 249 ntBASIC1.54□□□□□ -2.16
Cux1P53564 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC1.54□□□□□ -2.16
Cux1P53564 AC154636.3-201ENSMUST00000221489 1214 ntBASIC1.54□□□□□ -2.16
Cux1P53564 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Cux1P53564 Gm25755-201ENSMUST00000083396 107 ntBASIC1.54□□□□□ -2.16
Cux1P53564 Mir221-201ENSMUST00000083488 95 ntBASIC1.54□□□□□ -2.16
Cux1P53564 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.54□□□□□ -2.16
Cux1P53564 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Cux1P53564 Gm25391-201ENSMUST00000157342 134 ntBASIC1.53□□□□□ -2.16
Cux1P53564 Gm25598-201ENSMUST00000179031 107 ntBASIC1.53□□□□□ -2.16
Cux1P53564 Gm44446-201ENSMUST00000204864 255 ntBASIC1.53□□□□□ -2.16
Cux1P53564 Gm44857-201ENSMUST00000208331 196 ntBASIC1.53□□□□□ -2.16
Cux1P53564 Gm44657-201ENSMUST00000208568 450 ntBASIC1.53□□□□□ -2.16
Cux1P53564 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.53□□□□□ -2.16
Cux1P53564 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.17
Cux1P53564 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.17
Cux1P53564 Gm24049-201ENSMUST00000102409 100 ntBASIC1.52□□□□□ -2.17
Cux1P53564 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
Cux1P53564 Gm15029-201ENSMUST00000119742 199 ntBASIC1.52□□□□□ -2.17
Cux1P53564 Gm23324-201ENSMUST00000157421 131 ntBASIC1.52□□□□□ -2.17
Cux1P53564 Gm24875-201ENSMUST00000158888 104 ntBASIC1.52□□□□□ -2.17
Cux1P53564 Gm17655-201ENSMUST00000167969 255 ntBASIC1.52□□□□□ -2.17
Cux1P53564 Gm7346-201ENSMUST00000169661 476 ntBASIC1.52□□□□□ -2.17
Cux1P53564 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.52□□□□□ -2.17
Cux1P53564 AC154257.2-201ENSMUST00000224166 340 ntBASIC1.52□□□□□ -2.17
Cux1P53564 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.52□□□□□ -2.17
Cux1P53564 Gm24142-201ENSMUST00000101960 107 ntBASIC1.51□□□□□ -2.17
Cux1P53564 U6.1-201ENSMUST00000157443 101 ntBASIC1.51□□□□□ -2.17
Cux1P53564 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Cux1P53564 Snora24-201ENSMUST00000174989 130 ntBASIC1.51□□□□□ -2.17
Cux1P53564 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC1.51□□□□□ -2.17
Cux1P53564 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.51□□□□□ -2.17
Cux1P53564 Gm44052-201ENSMUST00000203382 396 ntBASIC1.51□□□□□ -2.17
Cux1P53564 Gm45116-201ENSMUST00000207392 275 ntBASIC1.51□□□□□ -2.17
Cux1P53564 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC1.51□□□□□ -2.17
Cux1P53564 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Cux1P53564 Gm25810-201ENSMUST00000082752 108 ntBASIC1.51□□□□□ -2.17
Cux1P53564 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Cux1P53564 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.5□□□□□ -2.17
Cux1P53564 Gm14428-201ENSMUST00000120408 822 ntBASIC1.5□□□□□ -2.17
Cux1P53564 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC1.5□□□□□ -2.17
Cux1P53564 Gm25220-201ENSMUST00000157546 95 ntBASIC1.5□□□□□ -2.17
Cux1P53564 Gm22769-201ENSMUST00000158367 98 ntBASIC1.5□□□□□ -2.17
Cux1P53564 Gm24222-201ENSMUST00000158834 93 ntBASIC1.5□□□□□ -2.17
Cux1P53564 Mir1264-201ENSMUST00000175381 86 ntBASIC1.5□□□□□ -2.17
Cux1P53564 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.5□□□□□ -2.17
Cux1P53564 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Cux1P53564 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.5□□□□□ -2.17
Cux1P53564 Gm43979-201ENSMUST00000203179 475 ntBASIC1.5□□□□□ -2.17
Cux1P53564 Gm43978-201ENSMUST00000203491 451 ntBASIC1.5□□□□□ -2.17
Cux1P53564 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC1.5□□□□□ -2.17
Cux1P53564 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.5□□□□□ -2.17
Cux1P53564 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Cux1P53564 Gm25739-201ENSMUST00000082886 107 ntBASIC1.5□□□□□ -2.17
Cux1P53564 Mir208a-201ENSMUST00000083498 83 ntBASIC1.5□□□□□ -2.17
Cux1P53564 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Cux1P53564 Gm8217-201ENSMUST00000119136 465 ntBASIC1.5□□□□□ -2.17
Cux1P53564 Gm11786-201ENSMUST00000120799 155 ntBASIC1.5□□□□□ -2.17
Cux1P53564 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC1.5□□□□□ -2.17
Cux1P53564 Gm24552-201ENSMUST00000158646 103 ntBASIC1.5□□□□□ -2.17
Cux1P53564 Gm18964-201ENSMUST00000193013 563 ntBASIC1.5□□□□□ -2.17
Cux1P53564 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Cux1P53564 Gm15067-201ENSMUST00000119534 156 ntBASIC1.49□□□□□ -2.17
Cux1P53564 Gm14694-201ENSMUST00000121856 282 ntBASIC1.49□□□□□ -2.17
Cux1P53564 Gm23559-201ENSMUST00000157824 103 ntBASIC1.49□□□□□ -2.17
Cux1P53564 Gm25901-201ENSMUST00000158494 130 ntBASIC1.49□□□□□ -2.17
Cux1P53564 Gm17164-201ENSMUST00000169013 506 ntBASIC1.49□□□□□ -2.17
Cux1P53564 Mir3066-201ENSMUST00000175296 83 ntBASIC1.49□□□□□ -2.17
Cux1P53564 Gm22131-201ENSMUST00000178415 94 ntBASIC1.49□□□□□ -2.17
Cux1P53564 Mir6338-201ENSMUST00000183389 109 ntBASIC1.49□□□□□ -2.17
Cux1P53564 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Cux1P53564 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm29299-201ENSMUST00000185609 923 ntBASIC1.49□□□□□ -2.17
Cux1P53564 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Cux1P53564 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms