Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm26479-201ENSMUST00000122620 106 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC4.62□□□□□ -1.67
Rfx1P48377 Gm16250-201ENSMUST00000148974 256 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 Mir6371-201ENSMUST00000184470 111 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 Mir6715-201ENSMUST00000184990 57 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 Gm29262-201ENSMUST00000190084 196 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 Mir7682-201ENSMUST00000198467 58 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 Gm44887-201ENSMUST00000208980 178 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 CT030166.2-201ENSMUST00000222021 368 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 Gm9818-201ENSMUST00000050900 255 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 Mir208a-201ENSMUST00000083498 83 ntBASIC4.62□□□□□ -1.67
Rfx1P48377 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Rfx1P48377 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Rfx1P48377 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Rfx1P48377 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Rfx1P48377 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Rfx1P48377 Gm10033-201ENSMUST00000072427 1813 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Rfx1P48377 Gm24914-201ENSMUST00000157285 313 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 Gm26186-201ENSMUST00000157689 125 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 Ear-ps4-201ENSMUST00000166834 450 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 Gm17159-201ENSMUST00000169043 482 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
Rfx1P48377 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 Gm7958-201ENSMUST00000178255 468 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 Gm7950-201ENSMUST00000179633 468 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 Gm25939-201ENSMUST00000179876 191 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 Gm27796-201ENSMUST00000183863 261 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Rfx1P48377 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Rfx1P48377 Gm43604-201ENSMUST00000199799 705 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 Gm45420-201ENSMUST00000211243 425 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC4.61□□□□□ -1.67
Rfx1P48377 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 AC155167.3-201ENSMUST00000226349 217 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 Gm5899-201ENSMUST00000071770 270 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 Gm23099-201ENSMUST00000083454 139 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 Mir346-201ENSMUST00000083547 98 ntBASIC4.61□□□□□ -1.67
Rfx1P48377 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Rfx1P48377 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Rfx1P48377 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Rfx1P48377 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Rfx1P48377 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Rfx1P48377 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Rfx1P48377 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Rfx1P48377 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.6□□□□□ -1.67
Rfx1P48377 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Rfx1P48377 Gm26387-201ENSMUST00000104238 132 ntBASIC4.6□□□□□ -1.67
Rfx1P48377 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Rfx1P48377 Gm13714-201ENSMUST00000117313 221 ntBASIC4.6□□□□□ -1.67
Rfx1P48377 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC4.6□□□□□ -1.67
Rfx1P48377 Gm25965-201ENSMUST00000157170 93 ntBASIC4.6□□□□□ -1.67
Rfx1P48377 Gm22378-201ENSMUST00000157481 111 ntBASIC4.6□□□□□ -1.67
Rfx1P48377 Gm23782-201ENSMUST00000157939 120 ntBASIC4.6□□□□□ -1.67
Rfx1P48377 Gm25333-201ENSMUST00000158035 246 ntBASIC4.6□□□□□ -1.67
Rfx1P48377 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Rfx1P48377 Gm23370-202ENSMUST00000197008 129 ntBASIC4.6□□□□□ -1.67
Rfx1P48377 Gm43814-201ENSMUST00000197851 413 ntBASIC4.6□□□□□ -1.67
Rfx1P48377 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.6□□□□□ -1.67
Rfx1P48377 CT030182.3-201ENSMUST00000225986 582 ntBASIC4.6□□□□□ -1.67
Rfx1P48377 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Rfx1P48377 Snord21-201ENSMUST00000082519 94 ntBASIC4.6□□□□□ -1.67
Rfx1P48377 Gm25482-201ENSMUST00000083225 107 ntBASIC4.6□□□□□ -1.67
Rfx1P48377 Mir383-201ENSMUST00000083523 70 ntBASIC4.6□□□□□ -1.67
Rfx1P48377 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Rfx1P48377 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Rfx1P48377 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
Rfx1P48377 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Rfx1P48377 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Rfx1P48377 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Rfx1P48377 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
Rfx1P48377 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
Rfx1P48377 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Rfx1P48377 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Rfx1P48377 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Rfx1P48377 Gm9157-201ENSMUST00000117673 225 ntBASIC4.59□□□□□ -1.67
Rfx1P48377 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Rfx1P48377 Gm27611-201ENSMUST00000184690 108 ntBASIC4.59□□□□□ -1.67
Rfx1P48377 Gm28828-201ENSMUST00000186601 696 ntBASIC4.59□□□□□ -1.67
Rfx1P48377 Gm37089-201ENSMUST00000195616 129 ntBASIC4.59□□□□□ -1.67
Rfx1P48377 Gm44343-201ENSMUST00000196702 90 ntBASIC4.59□□□□□ -1.67
Rfx1P48377 Gm43326-201ENSMUST00000198459 1638 ntBASIC4.59□□□□□ -1.67
Rfx1P48377 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.59□□□□□ -1.67
Rfx1P48377 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.59□□□□□ -1.67
Rfx1P48377 Gm23443-201ENSMUST00000082916 128 ntBASIC4.59□□□□□ -1.67
Rfx1P48377 Mir370-201ENSMUST00000083499 79 ntBASIC4.59□□□□□ -1.67
Rfx1P48377 Gm23875-201ENSMUST00000083711 318 ntBASIC4.59□□□□□ -1.67
Rfx1P48377 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rfx1P48377 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rfx1P48377 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Rfx1P48377 Gm14628-201ENSMUST00000117508 635 ntBASIC4.58□□□□□ -1.68
Rfx1P48377 Gm12782-201ENSMUST00000117519 727 ntBASIC4.58□□□□□ -1.68
Rfx1P48377 Gm13687-201ENSMUST00000119857 282 ntBASIC4.58□□□□□ -1.68
Rfx1P48377 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Rfx1P48377 Gm25198-201ENSMUST00000178574 110 ntBASIC4.58□□□□□ -1.68
Rfx1P48377 Gm27828-201ENSMUST00000184108 119 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms