Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 CT025526.1-201ENSMUST00000217327 267 ntBASIC2.22□□□□□ -2.05
Foxa1P35582 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Foxa1P35582 Gm46193-201ENSMUST00000219399 364 ntBASIC2.22□□□□□ -2.05
Foxa1P35582 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.22□□□□□ -2.05
Foxa1P35582 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.22□□□□□ -2.05
Foxa1P35582 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.22□□□□□ -2.05
Foxa1P35582 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.22□□□□□ -2.05
Foxa1P35582 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.22□□□□□ -2.05
Foxa1P35582 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.22□□□□□ -2.05
Foxa1P35582 Ear14-201ENSMUST00000049559 468 ntBASIC2.22□□□□□ -2.05
Foxa1P35582 Gm4945-201ENSMUST00000075152 453 ntBASIC2.22□□□□□ -2.05
Foxa1P35582 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Foxa1P35582 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
Foxa1P35582 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
Foxa1P35582 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Foxa1P35582 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.21□□□□□ -2.06
Foxa1P35582 Gm23803-201ENSMUST00000104610 132 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm14918-201ENSMUST00000118153 268 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm12053-201ENSMUST00000119022 252 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm15760-201ENSMUST00000119553 283 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm12443-201ENSMUST00000122308 323 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm25318-201ENSMUST00000122554 314 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.21□□□□□ -2.06
Foxa1P35582 Gm23980-201ENSMUST00000157135 158 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.21□□□□□ -2.06
Foxa1P35582 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Foxa1P35582 Gm21754-201ENSMUST00000177550 479 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm21729-201ENSMUST00000180058 664 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm21853-201ENSMUST00000180071 664 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.21□□□□□ -2.06
Foxa1P35582 Mir7081-201ENSMUST00000184490 75 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm8151-201ENSMUST00000184817 871 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm28900-201ENSMUST00000185232 156 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm29495-201ENSMUST00000189319 664 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm44324-201ENSMUST00000198517 135 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.21□□□□□ -2.06
Foxa1P35582 Gm44657-201ENSMUST00000208568 450 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm45240-201ENSMUST00000211437 674 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm45772-201ENSMUST00000212961 240 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm19441-201ENSMUST00000221545 330 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm5374-201ENSMUST00000222868 657 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Foxa1P35582 Gm25199-201ENSMUST00000083095 104 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Gm26263-201ENSMUST00000083281 164 ntBASIC2.21□□□□□ -2.06
Foxa1P35582 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Foxa1P35582 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
Foxa1P35582 Gm22782-201ENSMUST00000104082 132 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Gm25509-201ENSMUST00000116985 106 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Gm12793-201ENSMUST00000119268 292 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Gm12806-201ENSMUST00000119384 268 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Gm11359-201ENSMUST00000120039 567 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Gm22500-201ENSMUST00000158982 99 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.2□□□□□ -2.06
Foxa1P35582 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Foxa1P35582 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Foxa1P35582 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Foxa1P35582 Gm23190-201ENSMUST00000180307 64 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Mir6341-201ENSMUST00000183490 121 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Gm27845-201ENSMUST00000184479 114 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Mir6383-201ENSMUST00000184545 116 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Gm27520-201ENSMUST00000184872 81 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Gm28647-201ENSMUST00000188416 197 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.2□□□□□ -2.06
Foxa1P35582 Gm45101-201ENSMUST00000208327 232 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Gm45387-201ENSMUST00000209792 632 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Foxa1P35582 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Foxa1P35582 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Foxa1P35582 Gm26228-201ENSMUST00000082512 107 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Gm25080-201ENSMUST00000082526 107 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Gm22974-201ENSMUST00000083301 103 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Gm23096-201ENSMUST00000083447 107 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Gm25518-201ENSMUST00000083864 107 ntBASIC2.2□□□□□ -2.06
Foxa1P35582 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Foxa1P35582 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Foxa1P35582 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Foxa1P35582 AC163660.3-201ENSMUST00000224253 1563 ntBASIC2.19□□□□□ -2.06
Foxa1P35582 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.19□□□□□ -2.06
Foxa1P35582 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Foxa1P35582 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Foxa1P35582 Gm13343-201ENSMUST00000116474 105 ntBASIC2.19□□□□□ -2.06
Foxa1P35582 Gm14558-201ENSMUST00000117458 381 ntBASIC2.19□□□□□ -2.06
Foxa1P35582 Gm13541-201ENSMUST00000119519 283 ntBASIC2.19□□□□□ -2.06
Foxa1P35582 Gm12071-201ENSMUST00000121968 469 ntBASIC2.19□□□□□ -2.06
Foxa1P35582 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.19□□□□□ -2.06
Foxa1P35582 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.19□□□□□ -2.06
Foxa1P35582 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Foxa1P35582 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.19□□□□□ -2.06
Foxa1P35582 Gm23068-201ENSMUST00000158239 293 ntBASIC2.19□□□□□ -2.06
Foxa1P35582 Cfap61-214ENSMUST00000167179 183 ntBASIC2.19□□□□□ -2.06
Foxa1P35582 Gm27313-201ENSMUST00000183500 142 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms