Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm25308-201ENSMUST00000104171 158 ntBASIC1.86□□□□□ -2.11
Sdc1P18828 Gm15714-201ENSMUST00000117168 250 ntBASIC1.86□□□□□ -2.11
Sdc1P18828 Gm15896-201ENSMUST00000118045 440 ntBASIC1.86□□□□□ -2.11
Sdc1P18828 Gm11352-201ENSMUST00000119264 517 ntBASIC1.86□□□□□ -2.11
Sdc1P18828 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.86□□□□□ -2.11
Sdc1P18828 Gm12693-201ENSMUST00000121965 483 ntBASIC1.86□□□□□ -2.11
Sdc1P18828 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.86□□□□□ -2.11
Sdc1P18828 Mir1942-201ENSMUST00000157274 63 ntBASIC1.86□□□□□ -2.11
Sdc1P18828 Gm23332-201ENSMUST00000157424 275 ntBASIC1.86□□□□□ -2.11
Sdc1P18828 Gm22367-201ENSMUST00000178930 132 ntBASIC1.86□□□□□ -2.11
Sdc1P18828 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Sdc1P18828 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.86□□□□□ -2.11
Sdc1P18828 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Sdc1P18828 Gm29809-201ENSMUST00000218423 493 ntBASIC1.86□□□□□ -2.11
Sdc1P18828 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC1.86□□□□□ -2.11
Sdc1P18828 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Sdc1P18828 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.86□□□□□ -2.11
Sdc1P18828 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Sdc1P18828 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Sdc1P18828 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Sdc1P18828 Gm14894-201ENSMUST00000117170 270 ntBASIC1.85□□□□□ -2.11
Sdc1P18828 Gm12787-201ENSMUST00000119234 396 ntBASIC1.85□□□□□ -2.11
Sdc1P18828 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.85□□□□□ -2.11
Sdc1P18828 Gm15878-201ENSMUST00000127561 306 ntBASIC1.85□□□□□ -2.11
Sdc1P18828 Gm22141-201ENSMUST00000157403 277 ntBASIC1.85□□□□□ -2.11
Sdc1P18828 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC1.85□□□□□ -2.11
Sdc1P18828 Gm37449-201ENSMUST00000193016 270 ntBASIC1.85□□□□□ -2.11
Sdc1P18828 Gm18658-201ENSMUST00000195558 270 ntBASIC1.85□□□□□ -2.11
Sdc1P18828 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC1.85□□□□□ -2.11
Sdc1P18828 Gm43004-201ENSMUST00000201872 703 ntBASIC1.85□□□□□ -2.11
Sdc1P18828 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.85□□□□□ -2.11
Sdc1P18828 AC192616.3-201ENSMUST00000220797 1124 ntBASIC1.85□□□□□ -2.11
Sdc1P18828 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.85□□□□□ -2.11
Sdc1P18828 AC167192.4-201ENSMUST00000224087 993 ntBASIC1.85□□□□□ -2.11
Sdc1P18828 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.85□□□□□ -2.11
Sdc1P18828 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Sdc1P18828 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC1.85□□□□□ -2.11
Sdc1P18828 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Sdc1P18828 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
Sdc1P18828 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Sdc1P18828 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Sdc1P18828 Gm23128-201ENSMUST00000104257 132 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm14774-201ENSMUST00000117857 536 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm12102-201ENSMUST00000118251 604 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm15211-201ENSMUST00000118932 528 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm12872-201ENSMUST00000121835 320 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm14765-201ENSMUST00000121954 326 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC1.84□□□□□ -2.11
Sdc1P18828 Gm23469-201ENSMUST00000157131 104 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm22037-201ENSMUST00000157280 296 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm25670-201ENSMUST00000178423 107 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm26239-201ENSMUST00000178842 107 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm24267-201ENSMUST00000179841 107 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Sdc1P18828 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.84□□□□□ -2.11
Sdc1P18828 Gm10193-201ENSMUST00000188288 231 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm23128-202ENSMUST00000196578 133 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm18748-201ENSMUST00000198507 622 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.84□□□□□ -2.11
Sdc1P18828 Gm42475-201ENSMUST00000201212 295 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm43264-201ENSMUST00000202284 325 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm34314-201ENSMUST00000203622 367 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm44182-201ENSMUST00000204052 115 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Sdc1P18828 Gm7214-201ENSMUST00000222428 272 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Sdc1P18828 AC166830.1-201ENSMUST00000224201 533 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm24292-201ENSMUST00000082888 107 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 Gm25404-201ENSMUST00000082970 107 ntBASIC1.84□□□□□ -2.11
Sdc1P18828 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Sdc1P18828 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Sdc1P18828 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Sdc1P18828 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 Gm24670-201ENSMUST00000104154 132 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Sdc1P18828 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 Gm14881-201ENSMUST00000120366 372 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 Gm13368-201ENSMUST00000122443 430 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 Gm24517-201ENSMUST00000122560 107 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 Gm22389-201ENSMUST00000158193 301 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 Gm15914-201ENSMUST00000161922 309 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 Gm25243-201ENSMUST00000174912 207 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Sdc1P18828 Gm23269-201ENSMUST00000178701 107 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 Gm22633-201ENSMUST00000179834 107 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC1.83□□□□□ -2.12
Sdc1P18828 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.83□□□□□ -2.12
Sdc1P18828 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.83□□□□□ -2.12
Sdc1P18828 Gm7692-201ENSMUST00000213534 409 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 Gm20304-201ENSMUST00000218168 444 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.83□□□□□ -2.12
Sdc1P18828 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.83□□□□□ -2.12
Sdc1P18828 n-R5s166-201ENSMUST00000082898 121 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms