Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.9□□□□□ -2.11
Cdx1P18111 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Cdx1P18111 Gm38071-201ENSMUST00000195792 3378 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 Gm23803-201ENSMUST00000104610 132 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 Mir466n-201ENSMUST00000104798 94 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Cdx1P18111 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC1.89□□□□□ -2.11
Cdx1P18111 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC1.89□□□□□ -2.11
Cdx1P18111 Gm24075-201ENSMUST00000158175 72 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 Gm25658-201ENSMUST00000158472 128 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 Gm25365-201ENSMUST00000158852 121 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Cdx1P18111 Gm27991-201ENSMUST00000184804 137 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 Gm38213-201ENSMUST00000193203 173 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 Gm23370-202ENSMUST00000197008 129 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 Mir378a-201ENSMUST00000198300 66 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 Gm26379-202ENSMUST00000200225 132 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 Gm18991-201ENSMUST00000209225 746 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.89□□□□□ -2.11
Cdx1P18111 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.89□□□□□ -2.11
Cdx1P18111 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC1.89□□□□□ -2.11
Cdx1P18111 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Cdx1P18111 Gm25788-201ENSMUST00000082721 131 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 Mir19a-201ENSMUST00000083482 82 ntBASIC1.89□□□□□ -2.11
Cdx1P18111 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Cdx1P18111 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Cdx1P18111 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.88□□□□□ -2.11
Cdx1P18111 Gm11943-201ENSMUST00000119473 327 ntBASIC1.88□□□□□ -2.11
Cdx1P18111 Gm16510-201ENSMUST00000153501 249 ntBASIC1.88□□□□□ -2.11
Cdx1P18111 Gm22227-201ENSMUST00000157356 259 ntBASIC1.88□□□□□ -2.11
Cdx1P18111 Gm16584-201ENSMUST00000159267 189 ntBASIC1.88□□□□□ -2.11
Cdx1P18111 Gm23813-201ENSMUST00000175153 77 ntBASIC1.88□□□□□ -2.11
Cdx1P18111 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Cdx1P18111 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.88□□□□□ -2.11
Cdx1P18111 Gm37119-201ENSMUST00000195691 389 ntBASIC1.88□□□□□ -2.11
Cdx1P18111 Gm43804-201ENSMUST00000198280 456 ntBASIC1.88□□□□□ -2.11
Cdx1P18111 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.88□□□□□ -2.11
Cdx1P18111 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Cdx1P18111 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.88□□□□□ -2.11
Cdx1P18111 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.88□□□□□ -2.11
Cdx1P18111 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.88□□□□□ -2.11
Cdx1P18111 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.88□□□□□ -2.11
Cdx1P18111 Gm22494-201ENSMUST00000104495 128 ntBASIC1.87□□□□□ -2.11
Cdx1P18111 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Cdx1P18111 Gm15714-201ENSMUST00000117168 250 ntBASIC1.87□□□□□ -2.11
Cdx1P18111 Gm11352-201ENSMUST00000119264 517 ntBASIC1.87□□□□□ -2.11
Cdx1P18111 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.87□□□□□ -2.11
Cdx1P18111 Gm23889-201ENSMUST00000122689 104 ntBASIC1.87□□□□□ -2.11
Cdx1P18111 Gm22099-201ENSMUST00000157925 123 ntBASIC1.87□□□□□ -2.11
Cdx1P18111 Snord11-201ENSMUST00000158468 84 ntBASIC1.87□□□□□ -2.11
Cdx1P18111 Gm7258-201ENSMUST00000179317 300 ntBASIC1.87□□□□□ -2.11
Cdx1P18111 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.87□□□□□ -2.11
Cdx1P18111 Gm19891-201ENSMUST00000189771 303 ntBASIC1.87□□□□□ -2.11
Cdx1P18111 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.87□□□□□ -2.11
Cdx1P18111 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.87□□□□□ -2.11
Cdx1P18111 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Cdx1P18111 Gm24661-201ENSMUST00000083205 104 ntBASIC1.87□□□□□ -2.11
Cdx1P18111 Gm23042-201ENSMUST00000083866 101 ntBASIC1.87□□□□□ -2.11
Cdx1P18111 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Cdx1P18111 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Cdx1P18111 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Cdx1P18111 Gm25529-201ENSMUST00000104850 92 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Gm14774-201ENSMUST00000117857 536 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Gm15067-201ENSMUST00000119534 156 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Gm16412-201ENSMUST00000121602 273 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Gm24937-201ENSMUST00000122597 134 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Gm24839-201ENSMUST00000122602 107 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Gm24784-201ENSMUST00000157640 62 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Gm25711-201ENSMUST00000158633 128 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Gm10177-202ENSMUST00000161698 207 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Gm3221-201ENSMUST00000164869 440 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Gm17063-201ENSMUST00000168135 456 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Cdx1P18111 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.86□□□□□ -2.11
Cdx1P18111 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Cdx1P18111 Gm25642-201ENSMUST00000175137 66 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Gm19932-201ENSMUST00000177033 313 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Cdx1P18111 Gm8532-201ENSMUST00000179174 461 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.86□□□□□ -2.11
Cdx1P18111 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Gm23848-201ENSMUST00000083826 106 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Cdx1P18111 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.86□□□□□ -2.11
Cdx1P18111 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Cdx1P18111 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Cdx1P18111 Mir92-1-201ENSMUST00000102108 80 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Gm15211-201ENSMUST00000118932 528 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Gm14049-201ENSMUST00000121009 636 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Gm15878-201ENSMUST00000127561 306 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.85□□□□□ -2.11
Cdx1P18111 Gm23332-201ENSMUST00000157424 275 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Gm23078-201ENSMUST00000157848 148 ntBASIC1.85□□□□□ -2.11
Cdx1P18111 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms