Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
Col1a1P11087 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 Gm14411-201ENSMUST00000121798 914 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 Gm23559-201ENSMUST00000157824 103 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 Gm26089-201ENSMUST00000157898 107 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 Gm8161-201ENSMUST00000168739 481 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 Mir3066-201ENSMUST00000175296 83 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 Gm25598-201ENSMUST00000179031 107 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 Gm21064-202ENSMUST00000190583 278 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 Gm18747-201ENSMUST00000198129 648 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 Gm43284-201ENSMUST00000200103 253 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 Gm43578-201ENSMUST00000201250 459 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 Gm44472-201ENSMUST00000204922 943 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 Gm44657-201ENSMUST00000208568 450 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Col1a1P11087 AC115047.1-201ENSMUST00000213795 322 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 AC154636.3-201ENSMUST00000221489 1214 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Col1a1P11087 Gm5583-201ENSMUST00000174328 1519 ntBASIC1.21□□□□□ -2.22
Col1a1P11087 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
Col1a1P11087 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.21□□□□□ -2.22
Col1a1P11087 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.21□□□□□ -2.22
Col1a1P11087 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC1.21□□□□□ -2.22
Col1a1P11087 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.21□□□□□ -2.22
Col1a1P11087 Gm25391-201ENSMUST00000157342 134 ntBASIC1.21□□□□□ -2.22
Col1a1P11087 Gm23137-201ENSMUST00000157559 107 ntBASIC1.21□□□□□ -2.22
Col1a1P11087 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Col1a1P11087 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.21□□□□□ -2.22
Col1a1P11087 Gm18964-201ENSMUST00000193013 563 ntBASIC1.21□□□□□ -2.22
Col1a1P11087 Gm45754-201ENSMUST00000212380 279 ntBASIC1.21□□□□□ -2.22
Col1a1P11087 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.21□□□□□ -2.22
Col1a1P11087 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC1.21□□□□□ -2.22
Col1a1P11087 Gm26226-201ENSMUST00000082509 116 ntBASIC1.21□□□□□ -2.22
Col1a1P11087 Gm25739-201ENSMUST00000082886 107 ntBASIC1.21□□□□□ -2.22
Col1a1P11087 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Col1a1P11087 Gm14073-201ENSMUST00000117344 381 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Gm13806-201ENSMUST00000117822 325 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Gm8217-201ENSMUST00000119136 465 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Gm13239-201ENSMUST00000119920 637 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Gm13080-201ENSMUST00000120556 420 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Gm25901-201ENSMUST00000158494 130 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Gm24878-201ENSMUST00000158782 104 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Gm5277-201ENSMUST00000164923 556 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Mir5101-201ENSMUST00000175181 83 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Gm24925-201ENSMUST00000178157 107 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Gm26960-201ENSMUST00000182263 412 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.2□□□□□ -2.22
Col1a1P11087 Gm43043-201ENSMUST00000196579 412 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Gm18546-201ENSMUST00000197245 676 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Gm43345-201ENSMUST00000199484 269 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Gm18598-201ENSMUST00000207724 597 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.2□□□□□ -2.22
Col1a1P11087 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Mir325-201ENSMUST00000083491 98 ntBASIC1.2□□□□□ -2.22
Col1a1P11087 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.2□□□□□ -2.22
Col1a1P11087 Mir873a-201ENSMUST00000104863 77 ntBASIC1.19□□□□□ -2.22
Col1a1P11087 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col1a1P11087 Gm13085-201ENSMUST00000118356 171 ntBASIC1.19□□□□□ -2.22
Col1a1P11087 Gm15659-201ENSMUST00000118881 341 ntBASIC1.19□□□□□ -2.22
Col1a1P11087 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.19□□□□□ -2.22
Col1a1P11087 Gm13577-201ENSMUST00000121365 205 ntBASIC1.19□□□□□ -2.22
Col1a1P11087 Gm15281-201ENSMUST00000125181 351 ntBASIC1.19□□□□□ -2.22
Col1a1P11087 Gm4916-201ENSMUST00000126139 642 ntBASIC1.19□□□□□ -2.22
Col1a1P11087 Gm27761-201ENSMUST00000184091 131 ntBASIC1.19□□□□□ -2.22
Col1a1P11087 Gm29263-201ENSMUST00000188718 463 ntBASIC1.19□□□□□ -2.22
Col1a1P11087 Gm28384-201ENSMUST00000189079 463 ntBASIC1.19□□□□□ -2.22
Col1a1P11087 Gm18956-201ENSMUST00000192857 480 ntBASIC1.19□□□□□ -2.22
Col1a1P11087 Gm43652-201ENSMUST00000196219 675 ntBASIC1.19□□□□□ -2.22
Col1a1P11087 Gm43680-201ENSMUST00000199466 340 ntBASIC1.19□□□□□ -2.22
Col1a1P11087 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.19□□□□□ -2.22
Col1a1P11087 Gm23247-201ENSMUST00000083373 107 ntBASIC1.19□□□□□ -2.22
Col1a1P11087 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col1a1P11087 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.19□□□□□ -2.22
Col1a1P11087 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.19□□□□□ -2.22
Col1a1P11087 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
Col1a1P11087 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.19□□□□□ -2.22
Col1a1P11087 Gm25992-201ENSMUST00000102437 109 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm26363-201ENSMUST00000158866 83 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Gm25996-201ENSMUST00000175393 117 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm25944-201ENSMUST00000178758 94 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Gm27511-201ENSMUST00000183502 127 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col1a1P11087 Gm29299-201ENSMUST00000185609 923 ntBASIC1.18□□□□□ -2.22
Col1a1P11087 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms