Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
Hoxd3P09027 Mir767-201ENSMUST00000103256 107 ntBASIC3.69□□□□□ -1.82
Hoxd3P09027 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Hoxd3P09027 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Hoxd3P09027 Gm23948-201ENSMUST00000104030 132 ntBASIC3.69□□□□□ -1.82
Hoxd3P09027 Gm24855-201ENSMUST00000104848 97 ntBASIC3.69□□□□□ -1.82
Hoxd3P09027 Gm5391-201ENSMUST00000121155 613 ntBASIC3.69□□□□□ -1.82
Hoxd3P09027 Gm14402-201ENSMUST00000122217 508 ntBASIC3.69□□□□□ -1.82
Hoxd3P09027 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.69□□□□□ -1.82
Hoxd3P09027 Gm26490-201ENSMUST00000157879 140 ntBASIC3.69□□□□□ -1.82
Hoxd3P09027 Gm27387-201ENSMUST00000184583 116 ntBASIC3.69□□□□□ -1.82
Hoxd3P09027 Gm37123-201ENSMUST00000192994 1171 ntBASIC3.69□□□□□ -1.82
Hoxd3P09027 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.69□□□□□ -1.82
Hoxd3P09027 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.69□□□□□ -1.82
Hoxd3P09027 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.69□□□□□ -1.82
Hoxd3P09027 Gm25818-201ENSMUST00000083282 164 ntBASIC3.69□□□□□ -1.82
Hoxd3P09027 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC3.69□□□□□ -1.82
Hoxd3P09027 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.69□□□□□ -1.82
Hoxd3P09027 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Hoxd3P09027 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
Hoxd3P09027 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Hoxd3P09027 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
Hoxd3P09027 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Hoxd3P09027 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Hoxd3P09027 AC115970.1-201ENSMUST00000218910 1758 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Gm44439-201ENSMUST00000203379 3592 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Hoxd3P09027 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Hoxd3P09027 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Hoxd3P09027 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Hoxd3P09027 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Hoxd3P09027 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.68□□□□□ -1.82
Hoxd3P09027 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Hoxd3P09027 Gm23608-201ENSMUST00000104545 128 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Snord90-201ENSMUST00000104568 111 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Gm14518-201ENSMUST00000117351 542 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Gm11631-201ENSMUST00000119220 156 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Gm12934-201ENSMUST00000119221 343 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Gm13787-201ENSMUST00000120422 168 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Gm12723-201ENSMUST00000120700 451 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Gm12443-201ENSMUST00000122308 323 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Gm24440-201ENSMUST00000157236 63 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Gm25267-201ENSMUST00000158522 63 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Gm24512-201ENSMUST00000174963 65 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Mir7022-201ENSMUST00000183749 61 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Gm9238-201ENSMUST00000196181 329 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Hoxd3P09027 Gm43993-201ENSMUST00000203972 247 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Gm23303-201ENSMUST00000082714 152 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Gm24461-201ENSMUST00000082735 103 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Hoxd3P09027 AC131743.1-201ENSMUST00000222138 4024 ntBASIC3.68□□□□□ -1.82
Hoxd3P09027 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC3.68□□□□□ -1.82
Hoxd3P09027 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC3.68□□□□□ -1.82
Hoxd3P09027 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Hoxd3P09027 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Hoxd3P09027 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Hoxd3P09027 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hoxd3P09027 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hoxd3P09027 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hoxd3P09027 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Hoxd3P09027 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Hoxd3P09027 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hoxd3P09027 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hoxd3P09027 Gm12466-201ENSMUST00000121199 620 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Gm24113-201ENSMUST00000157477 276 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Gm25923-201ENSMUST00000158312 138 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Gm22429-201ENSMUST00000158553 130 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Gm22177-201ENSMUST00000175002 158 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Gm24086-201ENSMUST00000175171 98 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Mir6410-201ENSMUST00000184204 104 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Mir7028-201ENSMUST00000185016 64 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Gm18982-201ENSMUST00000198118 529 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Gm42663-201ENSMUST00000199883 351 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hoxd3P09027 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Hoxd3P09027 Gm25134-201ENSMUST00000082646 160 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Snora52-201ENSMUST00000082732 137 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Gm25147-201ENSMUST00000083030 105 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Gm24929-201ENSMUST00000083403 139 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
Hoxd3P09027 Gm37115-201ENSMUST00000193750 2849 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Hoxd3P09027 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC3.67□□□□□ -1.82
Hoxd3P09027 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Hoxd3P09027 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Hoxd3P09027 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Hoxd3P09027 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hoxd3P09027 AC149588.1-201ENSMUST00000228274 3745 ntBASIC3.67□□□□□ -1.82
Hoxd3P09027 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC3.67□□□□□ -1.82
Hoxd3P09027 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Hoxd3P09027 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.66□□□□□ -1.82
Hoxd3P09027 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Hoxd3P09027 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Hoxd3P09027 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Hoxd3P09027 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms