Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm8151-201ENSMUST00000184817 871 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC1.73□□□□□ -2.13
Col5a1O88207 Gm19177-201ENSMUST00000204520 613 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm17991-201ENSMUST00000208139 297 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm45367-201ENSMUST00000210171 347 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC1.73□□□□□ -2.13
Col5a1O88207 Gm35262-201ENSMUST00000215133 267 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Col5a1O88207 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 AC160550.3-201ENSMUST00000226818 400 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 AC102291.2-201ENSMUST00000228083 367 ntBASIC1.73□□□□□ -2.13
Col5a1O88207 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Col5a1O88207 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Col5a1O88207 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Col5a1O88207 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.72□□□□□ -2.13
Col5a1O88207 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.72□□□□□ -2.13
Col5a1O88207 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Col5a1O88207 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm14669-201ENSMUST00000118841 250 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm14906-201ENSMUST00000119265 390 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm12825-201ENSMUST00000120249 563 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm11522-201ENSMUST00000120533 176 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm2005-201ENSMUST00000120759 542 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm14766-201ENSMUST00000121689 367 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC1.72□□□□□ -2.13
Col5a1O88207 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC1.72□□□□□ -2.13
Col5a1O88207 Gm22390-201ENSMUST00000157588 325 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC1.72□□□□□ -2.13
Col5a1O88207 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Col5a1O88207 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Col5a1O88207 Mir6541-201ENSMUST00000183649 110 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.72□□□□□ -2.13
Col5a1O88207 Gm28200-201ENSMUST00000187778 315 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm29378-201ENSMUST00000188723 315 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
Col5a1O88207 Gm28909-201ENSMUST00000189406 315 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Col5a1O88207 Gm28211-201ENSMUST00000190920 315 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC1.72□□□□□ -2.13
Col5a1O88207 Gm38261-201ENSMUST00000192608 316 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm37817-201ENSMUST00000195276 434 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm45522-201ENSMUST00000210784 166 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm18414-201ENSMUST00000210858 694 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 AL669916.3-201ENSMUST00000213855 94 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 AL669916.6-201ENSMUST00000214610 94 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm18488-201ENSMUST00000215082 364 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 AL669916.4-201ENSMUST00000215976 94 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 AL669916.1-201ENSMUST00000217640 94 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Col5a1O88207 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Col5a1O88207 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Col5a1O88207 Gm16261-201ENSMUST00000096813 205 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Gm43404-201ENSMUST00000200424 2534 ntBASIC1.72□□□□□ -2.13
Col5a1O88207 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Col5a1O88207 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
Col5a1O88207 Gm25097-201ENSMUST00000104042 145 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
Col5a1O88207 Gm14358-201ENSMUST00000118458 403 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Gm14293-201ENSMUST00000118528 577 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Gm11404-201ENSMUST00000120872 494 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Gm12876-201ENSMUST00000120975 408 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Gm23429-201ENSMUST00000122486 149 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Gm2020-201ENSMUST00000145242 579 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Gm22225-201ENSMUST00000157358 278 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
Col5a1O88207 Gm29600-201ENSMUST00000188687 377 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Gm19123-201ENSMUST00000190716 651 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Gm37054-201ENSMUST00000193481 543 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Gm42465-201ENSMUST00000197036 492 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Gm42438-201ENSMUST00000197832 974 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Gm19649-201ENSMUST00000201126 822 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Gm45146-201ENSMUST00000207108 221 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 AC154426.1-201ENSMUST00000225614 1132 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Gm22978-201ENSMUST00000082607 160 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Mir148b-201ENSMUST00000083626 97 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Gm26108-201ENSMUST00000083973 191 ntBASIC1.71□□□□□ -2.14
Col5a1O88207 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Col5a1O88207 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Col5a1O88207 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm14899-201ENSMUST00000118673 548 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm14292-201ENSMUST00000118761 456 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm12706-201ENSMUST00000121588 698 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm12770-201ENSMUST00000121734 462 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Col5a1O88207 Gm23538-201ENSMUST00000157535 101 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm25365-201ENSMUST00000158852 121 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm26194-201ENSMUST00000175036 71 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm25873-201ENSMUST00000180317 107 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm27271-201ENSMUST00000183509 170 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm5731-201ENSMUST00000190969 481 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm38238-201ENSMUST00000194334 346 ntBASIC1.7□□□□□ -2.14
Col5a1O88207 Gm43115-201ENSMUST00000196244 160 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms