Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.58□□□□□ -2
Trav13d-3J3QMG8 AC154747.1-201ENSMUST00000225265 239 ntBASIC2.58□□□□□ -2
Trav13d-3J3QMG8 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.58□□□□□ -2
Trav13d-3J3QMG8 Gm23517-201ENSMUST00000082830 192 ntBASIC2.58□□□□□ -2
Trav13d-3J3QMG8 Gm23454-201ENSMUST00000083332 133 ntBASIC2.58□□□□□ -2
Trav13d-3J3QMG8 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Trav13d-3J3QMG8 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trav13d-3J3QMG8 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trav13d-3J3QMG8 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.58□□□□□ -2
Trav13d-3J3QMG8 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.57□□□□□ -2
Trav13d-3J3QMG8 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm14973-201ENSMUST00000117248 255 ntBASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm13475-201ENSMUST00000119290 234 ntBASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm11420-201ENSMUST00000120047 402 ntBASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm23325-201ENSMUST00000157422 129 ntBASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm27700-201ENSMUST00000185003 81 ntBASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm44446-201ENSMUST00000204864 255 ntBASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm6842-201ENSMUST00000211361 390 ntBASIC2.57□□□□□ -2
Trav13d-3J3QMG8 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm5374-201ENSMUST00000222868 657 ntBASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trav13d-3J3QMG8 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav13d-3J3QMG8 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm22939-201ENSMUST00000103958 131 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm24403-201ENSMUST00000104616 130 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm12765-201ENSMUST00000117273 615 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm14073-201ENSMUST00000117344 381 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm13504-201ENSMUST00000117490 316 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm14940-201ENSMUST00000119309 495 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm12515-201ENSMUST00000120116 361 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm26256-201ENSMUST00000122499 186 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm23184-201ENSMUST00000122594 131 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm22322-201ENSMUST00000157151 111 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm22891-201ENSMUST00000158641 164 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm24810-201ENSMUST00000175317 70 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm27624-201ENSMUST00000185047 177 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm38238-201ENSMUST00000194334 346 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm43393-201ENSMUST00000200147 194 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm44524-201ENSMUST00000203899 271 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm34783-201ENSMUST00000209159 303 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm9370-201ENSMUST00000222787 609 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trav13d-3J3QMG8 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm23627-201ENSMUST00000082459 107 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm22502-201ENSMUST00000082488 107 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Snora23-201ENSMUST00000082517 184 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm22977-201ENSMUST00000082615 107 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm24149-201ENSMUST00000082757 107 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trav13d-3J3QMG8 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trav13d-3J3QMG8 Gm7071-201ENSMUST00000120458 462 ntBASIC2.55□□□□□ -2
Trav13d-3J3QMG8 Gm23169-201ENSMUST00000157157 112 ntBASIC2.55□□□□□ -2
Trav13d-3J3QMG8 Gm25970-201ENSMUST00000157165 86 ntBASIC2.55□□□□□ -2
Trav13d-3J3QMG8 Gm22328-201ENSMUST00000158074 112 ntBASIC2.55□□□□□ -2
Trav13d-3J3QMG8 Gm25162-201ENSMUST00000158906 159 ntBASIC2.55□□□□□ -2
Trav13d-3J3QMG8 Gm27760-201ENSMUST00000185048 114 ntBASIC2.55□□□□□ -2
Trav13d-3J3QMG8 Gm28314-201ENSMUST00000191276 345 ntBASIC2.55□□□□□ -2
Trav13d-3J3QMG8 Gm29730-201ENSMUST00000192986 1396 ntBASIC2.55□□□□□ -2
Trav13d-3J3QMG8 Gm37007-201ENSMUST00000194234 319 ntBASIC2.55□□□□□ -2
Trav13d-3J3QMG8 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.55□□□□□ -2
Trav13d-3J3QMG8 Gm9402-201ENSMUST00000196849 388 ntBASIC2.55□□□□□ -2
Trav13d-3J3QMG8 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.55□□□□□ -2
Trav13d-3J3QMG8 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.55□□□□□ -2
Trav13d-3J3QMG8 Gm6615-201ENSMUST00000199426 631 ntBASIC2.55□□□□□ -2
Trav13d-3J3QMG8 Gm43901-201ENSMUST00000203247 453 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms