Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.6□□□□□ -1.83
Pcdh1F7BJK1 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm22657-201ENSMUST00000104197 132 ntBASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm15377-201ENSMUST00000119594 246 ntBASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm22766-201ENSMUST00000158372 99 ntBASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm22118-201ENSMUST00000175593 171 ntBASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm27585-201ENSMUST00000183717 199 ntBASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm27875-201ENSMUST00000184425 123 ntBASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm27414-201ENSMUST00000185033 381 ntBASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm37836-201ENSMUST00000195875 175 ntBASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm44343-201ENSMUST00000196702 90 ntBASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm4644-201ENSMUST00000197587 400 ntBASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm44703-201ENSMUST00000205724 248 ntBASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm6240-201ENSMUST00000208014 473 ntBASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Pcdh1F7BJK1 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Pcdh1F7BJK1 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Pcdh1F7BJK1 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Gm4736-201ENSMUST00000100870 380 ntBASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Gm25783-201ENSMUST00000122525 190 ntBASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Gm23789-201ENSMUST00000122536 301 ntBASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Gm22107-201ENSMUST00000122548 100 ntBASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Gm26412-201ENSMUST00000157666 55 ntBASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Gm24014-201ENSMUST00000157728 157 ntBASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Gm23196-201ENSMUST00000158806 107 ntBASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Gm16326-201ENSMUST00000162843 414 ntBASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Gm23215-201ENSMUST00000178153 121 ntBASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Gm7468-201ENSMUST00000203900 652 ntBASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Gm19790-201ENSMUST00000214414 251 ntBASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
Pcdh1F7BJK1 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm13155-201ENSMUST00000119277 646 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm12617-201ENSMUST00000121268 381 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm15263-201ENSMUST00000121556 642 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm8178-201ENSMUST00000121570 646 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm13419-201ENSMUST00000121711 271 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm22988-201ENSMUST00000122759 144 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm23641-201ENSMUST00000157857 101 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm23198-201ENSMUST00000158811 91 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm20542-201ENSMUST00000174582 372 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Mir6975-201ENSMUST00000184879 61 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Mir376a-201ENSMUST00000197584 68 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm44657-201ENSMUST00000208568 450 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm44887-201ENSMUST00000208980 178 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm10033-201ENSMUST00000072427 1813 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm26314-201ENSMUST00000083891 107 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Mir471-201ENSMUST00000093596 67 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.57□□□□□ -1.84
Pcdh1F7BJK1 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.56□□□□□ -1.84
Pcdh1F7BJK1 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms