Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm44559-201ENSMUST00000207177 1012 ntBASIC0.64□□□□□ -2.31
Col6a3E9PWQ3 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.64□□□□□ -2.31
Col6a3E9PWQ3 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
Col6a3E9PWQ3 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC0.64□□□□□ -2.31
Col6a3E9PWQ3 Mir466i-201ENSMUST00000116924 121 ntBASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 Gm12238-201ENSMUST00000127764 124 ntBASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 Gm25966-201ENSMUST00000157169 117 ntBASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 Gm27718-201ENSMUST00000183721 86 ntBASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 Crs-ps-201ENSMUST00000203723 760 ntBASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 Gm44718-201ENSMUST00000206886 359 ntBASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 Gm22026-201ENSMUST00000122735 281 ntBASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 Gm17100-201ENSMUST00000168963 272 ntBASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 Gm44483-201ENSMUST00000197203 97 ntBASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 Gm19244-201ENSMUST00000204340 253 ntBASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 Gm38104-201ENSMUST00000195121 1895 ntBASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC0.63□□□□□ -2.31
Col6a3E9PWQ3 Gm15112-201ENSMUST00000120152 860 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Gm14253-201ENSMUST00000122112 639 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Gm22535-201ENSMUST00000158174 119 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Gm24549-201ENSMUST00000158647 139 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Gm18611-201ENSMUST00000200334 1118 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Gm18338-201ENSMUST00000222381 560 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 n-R5s26-201ENSMUST00000104601 122 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Gm25283-201ENSMUST00000157272 77 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Gm22962-201ENSMUST00000157962 73 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Gm22689-201ENSMUST00000102452 110 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Gm25606-201ENSMUST00000158363 95 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Gm5277-201ENSMUST00000164923 556 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Gm37431-201ENSMUST00000195102 111 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Igkv11-114-201ENSMUST00000200013 346 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Gm45365-201ENSMUST00000209489 256 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Gm9628-201ENSMUST00000222169 725 ntBASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Col6a3E9PWQ3 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 Gm14537-201ENSMUST00000117464 599 ntBASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 Gm13574-201ENSMUST00000120482 394 ntBASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 Gm37219-201ENSMUST00000192036 926 ntBASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 Gm14624-201ENSMUST00000117746 192 ntBASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 Gm25905-201ENSMUST00000158490 101 ntBASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 Gm45192-201ENSMUST00000206749 283 ntBASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 Gm15095-201ENSMUST00000118996 1430 ntBASIC0.61□□□□□ -2.31
Col6a3E9PWQ3 Gm13359-201ENSMUST00000119000 695 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm15067-201ENSMUST00000119534 156 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 AC132121.1-201ENSMUST00000220774 332 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm25136-201ENSMUST00000083253 115 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm7739-201ENSMUST00000221131 1560 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm11854-201ENSMUST00000117839 446 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm23469-201ENSMUST00000157131 104 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm21737-201ENSMUST00000178112 664 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm21729-201ENSMUST00000180058 664 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm21853-201ENSMUST00000180071 664 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm20901-201ENSMUST00000180177 664 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm27427-201ENSMUST00000185134 193 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm29073-201ENSMUST00000185563 664 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm29495-201ENSMUST00000189319 664 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm28090-201ENSMUST00000189458 664 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm21647-201ENSMUST00000189755 664 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm29165-201ENSMUST00000190655 664 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm29211-201ENSMUST00000191470 664 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm36891-201ENSMUST00000191995 655 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 n-R5s202-201ENSMUST00000104517 114 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Gm28912-201ENSMUST00000189001 234 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Mir6964-201ENSMUST00000200252 59 ntBASIC0.6□□□□□ -2.31
Col6a3E9PWQ3 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.31
Col6a3E9PWQ3 Gm16458-201ENSMUST00000121428 502 ntBASIC0.59□□□□□ -2.31
Col6a3E9PWQ3 Gm22425-201ENSMUST00000158532 138 ntBASIC0.59□□□□□ -2.31
Col6a3E9PWQ3 Gm16490-201ENSMUST00000165299 351 ntBASIC0.59□□□□□ -2.31
Col6a3E9PWQ3 Gm25032-201ENSMUST00000175411 84 ntBASIC0.59□□□□□ -2.31
Col6a3E9PWQ3 Gm42976-201ENSMUST00000200313 222 ntBASIC0.59□□□□□ -2.31
Col6a3E9PWQ3 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC0.59□□□□□ -2.31
Col6a3E9PWQ3 Gm10264-201ENSMUST00000220589 429 ntBASIC0.59□□□□□ -2.31
Col6a3E9PWQ3 Gm22515-201ENSMUST00000158273 305 ntBASIC0.59□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms