Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Ccdc9bA3KGF9 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm42946-201ENSMUST00000196108 2570 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm26075-201ENSMUST00000104062 121 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm25915-201ENSMUST00000104265 126 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm24132-201ENSMUST00000104745 91 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm9157-201ENSMUST00000117673 225 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm14922-201ENSMUST00000121131 163 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm24774-201ENSMUST00000157384 134 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm24959-201ENSMUST00000157924 146 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm27535-201ENSMUST00000183814 157 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm38088-201ENSMUST00000195829 241 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm5002-201ENSMUST00000207145 223 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm44594-201ENSMUST00000208982 407 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm45553-201ENSMUST00000209929 507 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm45317-201ENSMUST00000210385 223 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm45907-201ENSMUST00000213023 193 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm5175-202ENSMUST00000219699 529 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 AC164437.2-201ENSMUST00000228915 797 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm23453-201ENSMUST00000083326 106 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm26165-201ENSMUST00000083791 138 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Ccdc9bA3KGF9 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Mdga2-203ENSMUST00000113942 423 ntBASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Gm6829-201ENSMUST00000119858 360 ntBASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Gm24167-201ENSMUST00000177733 124 ntBASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Gm24028-201ENSMUST00000178991 124 ntBASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Gm23571-201ENSMUST00000180073 127 ntBASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Gm27883-201ENSMUST00000183941 102 ntBASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Gm29097-201ENSMUST00000190273 422 ntBASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Gm37617-201ENSMUST00000194309 159 ntBASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Gm43651-201ENSMUST00000199796 439 ntBASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Gm38152-201ENSMUST00000195389 3566 ntBASIC3.97□□□□□ -1.77
Ccdc9bA3KGF9 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Ccdc9bA3KGF9 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Ccdc9bA3KGF9 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Ccdc9bA3KGF9 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.96□□□□□ -1.77
Ccdc9bA3KGF9 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Ccdc9bA3KGF9 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.96□□□□□ -1.77
Ccdc9bA3KGF9 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Mir551b-201ENSMUST00000102165 98 ntBASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Gm22498-201ENSMUST00000104497 86 ntBASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Gm15714-201ENSMUST00000117168 250 ntBASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Gm14500-201ENSMUST00000121647 113 ntBASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Gm14564-201ENSMUST00000122159 294 ntBASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Gm22957-201ENSMUST00000122511 123 ntBASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Gm22792-201ENSMUST00000157225 133 ntBASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Gm25223-201ENSMUST00000158200 110 ntBASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Gm22989-201ENSMUST00000158313 86 ntBASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Gm25264-201ENSMUST00000158519 117 ntBASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Gm17020-201ENSMUST00000172274 274 ntBASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Gm28830-201ENSMUST00000188192 213 ntBASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Gm26449-201ENSMUST00000082452 104 ntBASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Mir383-201ENSMUST00000083523 70 ntBASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Gm44542-201ENSMUST00000208677 4314 ntBASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ccdc9bA3KGF9 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ccdc9bA3KGF9 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms