Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Gm29011-201ENSMUST00000191059 712 ntBASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 Gm18635-201ENSMUST00000199020 1060 ntBASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 Gm44384-201ENSMUST00000200208 114 ntBASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 Gm43228-201ENSMUST00000200735 264 ntBASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 Gm43979-201ENSMUST00000203179 475 ntBASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 Gm18268-201ENSMUST00000208445 943 ntBASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 Gm45268-201ENSMUST00000210046 370 ntBASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 AC239878.2-201ENSMUST00000224048 464 ntBASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 CT485608.2-201ENSMUST00000227210 291 ntBASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 AC151902.1-201ENSMUST00000227800 375 ntBASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 Snora3-201ENSMUST00000083082 132 ntBASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 AL645643.1-201ENSMUST00000222438 3897 ntBASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Trav4-2A0A075B638 AC122887.2-201ENSMUST00000219465 1603 ntBASIC0.9□□□□□ -2.26
Trav4-2A0A075B638 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Gm2348-201ENSMUST00000108782 300 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Gm26049-201ENSMUST00000157313 108 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Gm26089-201ENSMUST00000157898 107 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Gm26157-201ENSMUST00000158974 126 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Gm25069-201ENSMUST00000175238 86 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Gm27959-201ENSMUST00000185172 111 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Gm37684-201ENSMUST00000192779 355 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Gm44182-201ENSMUST00000204052 115 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Gm18410-201ENSMUST00000207199 577 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Gm45636-201ENSMUST00000210497 1064 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Gm45530-201ENSMUST00000211658 225 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 AC069561.3-201ENSMUST00000217321 114 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Gm26128-201ENSMUST00000083170 110 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Mir151-201ENSMUST00000083678 68 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Gm25008-201ENSMUST00000083809 81 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Gm22723-201ENSMUST00000083820 129 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Gm23040-201ENSMUST00000083869 163 ntBASIC0.9□□□□□ -2.27
Trav4-2A0A075B638 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Gm14882-201ENSMUST00000117216 218 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Gm11352-201ENSMUST00000119264 517 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Gm14128-201ENSMUST00000119514 1011 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Gm11857-201ENSMUST00000119817 324 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Defa-ps6-201ENSMUST00000122172 282 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Mir1949-201ENSMUST00000157434 141 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Gm24358-201ENSMUST00000158424 288 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Snord43-201ENSMUST00000199549 108 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 AC115735.3-201ENSMUST00000227757 513 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Gm24805-201ENSMUST00000082931 104 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Gm23058-201ENSMUST00000093703 107 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Gm16261-201ENSMUST00000096813 205 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Gm10360-201ENSMUST00000097219 272 ntBASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Trav4-2A0A075B638 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm22488-201ENSMUST00000116811 127 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm24262-201ENSMUST00000157431 144 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm22217-201ENSMUST00000157556 313 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm22111-201ENSMUST00000178010 79 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm23687-201ENSMUST00000178664 79 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm24566-201ENSMUST00000179286 79 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm23305-201ENSMUST00000179342 79 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm26389-201ENSMUST00000179819 79 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm24264-201ENSMUST00000179835 94 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm22130-201ENSMUST00000179979 79 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm22393-201ENSMUST00000180153 79 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm25085-201ENSMUST00000180298 79 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm27711-201ENSMUST00000183802 118 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Mir7226-201ENSMUST00000184953 60 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm44050-201ENSMUST00000204263 527 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 AC137902.2-201ENSMUST00000227989 576 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Snord14a-201ENSMUST00000082807 87 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm26055-201ENSMUST00000083038 107 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Gm25411-201ENSMUST00000083760 151 ntBASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Trav4-2A0A075B638 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
Trav4-2A0A075B638 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Trav4-2A0A075B638 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms