Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Gm44114-201ENSMUST00000203270 2727 ntBASIC0.74□□□□□ -2.29
Trav4n-4A0A075B615 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4n-4A0A075B615 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Gm13343-201ENSMUST00000116474 105 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Gm7974-201ENSMUST00000117154 408 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Gm13728-201ENSMUST00000117471 400 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Gm13672-201ENSMUST00000117554 459 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Gm14566-201ENSMUST00000118915 321 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Gm6664-201ENSMUST00000119138 468 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Gm14785-201ENSMUST00000120185 539 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Traj60-201ENSMUST00000167781 54 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Mir6907-201ENSMUST00000183764 71 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Gm27878-201ENSMUST00000184000 106 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Mir6916-201ENSMUST00000184514 63 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Gm5329-201ENSMUST00000186898 463 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Gm29950-201ENSMUST00000195273 237 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Gm42807-201ENSMUST00000200141 329 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Gm42739-201ENSMUST00000200687 226 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Gm45438-201ENSMUST00000210242 564 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 CT571268.1-201ENSMUST00000222320 407 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Gm21937-201ENSMUST00000222825 218 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Gm36989-201ENSMUST00000193225 2160 ntBASIC0.73□□□□□ -2.29
Trav4n-4A0A075B615 Mdga2-203ENSMUST00000113942 423 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Gm649-201ENSMUST00000117284 1054 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Gm15120-201ENSMUST00000120602 301 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Gm12096-201ENSMUST00000121149 829 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Gm12639-201ENSMUST00000121400 493 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Gm6025-201ENSMUST00000121517 201 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Gm26049-201ENSMUST00000157313 108 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Gm24053-201ENSMUST00000158620 105 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Gm25026-201ENSMUST00000175017 188 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Gm22776-201ENSMUST00000178634 94 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Gm23767-201ENSMUST00000179278 94 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Gm29397-201ENSMUST00000185205 333 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Gm43199-201ENSMUST00000200019 307 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Gm44524-201ENSMUST00000203899 271 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 AC122924.2-201ENSMUST00000220799 298 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 AC137871.2-201ENSMUST00000226482 289 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 AC125464.1-201ENSMUST00000228013 512 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Mir323-201ENSMUST00000083683 86 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Gm16261-201ENSMUST00000096813 205 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 AC164629.4-201ENSMUST00000218505 3247 ntBASIC0.72□□□□□ -2.29
Trav4n-4A0A075B615 Gm12636-201ENSMUST00000117395 624 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Gm11490-201ENSMUST00000118128 272 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Gm12550-201ENSMUST00000118478 329 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Gm14463-201ENSMUST00000121117 498 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Gm8121-201ENSMUST00000153583 499 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Gm24858-201ENSMUST00000158058 323 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Ear-ps8-201ENSMUST00000161935 354 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Gm18358-201ENSMUST00000173179 1277 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Mir6381-201ENSMUST00000183426 87 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Mir8106-201ENSMUST00000184520 139 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Gm27419-201ENSMUST00000184576 109 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Gm45730-201ENSMUST00000212560 395 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Gm19326-201ENSMUST00000219818 326 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Hmgb1l-201ENSMUST00000082150 571 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.71□□□□□ -2.3
Trav4n-4A0A075B615 Gm23747-201ENSMUST00000104228 131 ntBASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Gm16431-201ENSMUST00000117454 431 ntBASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Gm9432-201ENSMUST00000117810 759 ntBASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Gm14945-201ENSMUST00000119556 1118 ntBASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Gm11430-201ENSMUST00000121317 217 ntBASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Gm22792-201ENSMUST00000157225 133 ntBASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Gm25637-201ENSMUST00000157529 107 ntBASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Gm25888-201ENSMUST00000157778 302 ntBASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Gm22099-201ENSMUST00000157925 123 ntBASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Mir669n-201ENSMUST00000158636 54 ntBASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Mir6341-201ENSMUST00000183490 121 ntBASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Gm28437-201ENSMUST00000190277 783 ntBASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Gm28466-201ENSMUST00000190678 659 ntBASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Gm38238-201ENSMUST00000194334 346 ntBASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Gm26226-201ENSMUST00000082509 116 ntBASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC0.7□□□□□ -2.3
Trav4n-4A0A075B615 Gm25068-201ENSMUST00000103895 110 ntBASIC0.69□□□□□ -2.3
Trav4n-4A0A075B615 Gm15176-201ENSMUST00000117734 135 ntBASIC0.69□□□□□ -2.3
Trav4n-4A0A075B615 Gm13903-201ENSMUST00000120945 193 ntBASIC0.69□□□□□ -2.3
Trav4n-4A0A075B615 Gm14629-201ENSMUST00000122428 144 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms