Protein–RNA interactions for Protein: Q9Z1G4

Atp6v0a1, V-type proton ATPase 116 kDa subunit a isoform 1, mousemouse

Known RBP Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v0a1Q9Z1G4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp6v0a1Q9Z1G4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.33■□□□□ 0.52
Atp6v0a1Q9Z1G4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Atp6v0a1Q9Z1G4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp6v0a1Q9Z1G4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Atp6v0a1Q9Z1G4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp6v0a1Q9Z1G4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Atp6v0a1Q9Z1G4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp6v0a1Q9Z1G4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp6v0a1Q9Z1G4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Atp6v0a1Q9Z1G4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6v0a1Q9Z1G4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6v0a1Q9Z1G4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6v0a1Q9Z1G4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6v0a1Q9Z1G4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.32■□□□□ 0.52
Atp6v0a1Q9Z1G4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6v0a1Q9Z1G4 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.32■□□□□ 0.52
Atp6v0a1Q9Z1G4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6v0a1Q9Z1G4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6v0a1Q9Z1G4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6v0a1Q9Z1G4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Atp6v0a1Q9Z1G4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Atp6v0a1Q9Z1G4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Atp6v0a1Q9Z1G4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.32■□□□□ 0.52
Atp6v0a1Q9Z1G4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6v0a1Q9Z1G4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6v0a1Q9Z1G4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v0a1Q9Z1G4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Atp6v0a1Q9Z1G4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v0a1Q9Z1G4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v0a1Q9Z1G4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v0a1Q9Z1G4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v0a1Q9Z1G4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.3■□□□□ 0.52
Atp6v0a1Q9Z1G4 Gm16061-201ENSMUST00000122167 857 ntBASIC18.3■□□□□ 0.52
Atp6v0a1Q9Z1G4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Atp6v0a1Q9Z1G4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.3■□□□□ 0.52
Atp6v0a1Q9Z1G4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Atp6v0a1Q9Z1G4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v0a1Q9Z1G4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Atp6v0a1Q9Z1G4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v0a1Q9Z1G4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6v0a1Q9Z1G4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Atp6v0a1Q9Z1G4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Atp6v0a1Q9Z1G4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms