Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Nr1h3Q9Z0Y9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.57■□□□□ 0.56
Nr1h3Q9Z0Y9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h3Q9Z0Y9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h3Q9Z0Y9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.57■□□□□ 0.56
Nr1h3Q9Z0Y9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h3Q9Z0Y9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h3Q9Z0Y9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h3Q9Z0Y9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1h3Q9Z0Y9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1h3Q9Z0Y9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1h3Q9Z0Y9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1h3Q9Z0Y9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.56■□□□□ 0.56
Nr1h3Q9Z0Y9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.56■□□□□ 0.56
Nr1h3Q9Z0Y9 Gm29518-201ENSMUST00000190858 372 ntBASIC18.56■□□□□ 0.56
Nr1h3Q9Z0Y9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1h3Q9Z0Y9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1h3Q9Z0Y9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Nr1h3Q9Z0Y9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Nr1h3Q9Z0Y9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.56■□□□□ 0.56
Nr1h3Q9Z0Y9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1h3Q9Z0Y9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Nr1h3Q9Z0Y9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1h3Q9Z0Y9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 Idnk-204ENSMUST00000226010 1898 ntBASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nr1h3Q9Z0Y9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1h3Q9Z0Y9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1h3Q9Z0Y9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1h3Q9Z0Y9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1h3Q9Z0Y9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1h3Q9Z0Y9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1h3Q9Z0Y9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1h3Q9Z0Y9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nr1h3Q9Z0Y9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Gm26039-201ENSMUST00000158152 144 ntBASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nr1h3Q9Z0Y9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1h3Q9Z0Y9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1h3Q9Z0Y9 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.52■□□□□ 0.56
Nr1h3Q9Z0Y9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1h3Q9Z0Y9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.52■□□□□ 0.56
Nr1h3Q9Z0Y9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Nr1h3Q9Z0Y9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.52■□□□□ 0.56
Nr1h3Q9Z0Y9 Gm17808-201ENSMUST00000200859 894 ntBASIC18.52■□□□□ 0.56
Nr1h3Q9Z0Y9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1h3Q9Z0Y9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1h3Q9Z0Y9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
Nr1h3Q9Z0Y9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1h3Q9Z0Y9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Nr1h3Q9Z0Y9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1h3Q9Z0Y9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nr1h3Q9Z0Y9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.52■□□□□ 0.56
Nr1h3Q9Z0Y9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nr1h3Q9Z0Y9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.51■□□□□ 0.55
Nr1h3Q9Z0Y9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms