Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcb1Q9Z0H3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Smarcb1Q9Z0H3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Gm27704-201ENSMUST00000185094 107 ntBASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Gm17808-201ENSMUST00000200859 894 ntBASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smarcb1Q9Z0H3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Gm11950-201ENSMUST00000121615 838 ntBASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Gm7284-201ENSMUST00000131667 944 ntBASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smarcb1Q9Z0H3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Smarcb1Q9Z0H3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Gm13186-201ENSMUST00000118031 316 ntBASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smarcb1Q9Z0H3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.69■□□□□ 0.42
Smarcb1Q9Z0H3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcb1Q9Z0H3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Smarcb1Q9Z0H3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.69■□□□□ 0.42
Smarcb1Q9Z0H3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcb1Q9Z0H3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Smarcb1Q9Z0H3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcb1Q9Z0H3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcb1Q9Z0H3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Smarcb1Q9Z0H3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Smarcb1Q9Z0H3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcb1Q9Z0H3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Smarcb1Q9Z0H3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Smarcb1Q9Z0H3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Smarcb1Q9Z0H3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.69■□□□□ 0.42
Smarcb1Q9Z0H3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms