Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CcsQ9WU84 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.31□□□□□ -0.28
CcsQ9WU84 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.31□□□□□ -0.28
CcsQ9WU84 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.31□□□□□ -0.28
CcsQ9WU84 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.3□□□□□ -0.28
CcsQ9WU84 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CcsQ9WU84 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.3□□□□□ -0.28
CcsQ9WU84 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcsQ9WU84 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CcsQ9WU84 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CcsQ9WU84 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CcsQ9WU84 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcsQ9WU84 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcsQ9WU84 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcsQ9WU84 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.3□□□□□ -0.28
CcsQ9WU84 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.3□□□□□ -0.28
CcsQ9WU84 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcsQ9WU84 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcsQ9WU84 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcsQ9WU84 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcsQ9WU84 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CcsQ9WU84 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CcsQ9WU84 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcsQ9WU84 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CcsQ9WU84 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CcsQ9WU84 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcsQ9WU84 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcsQ9WU84 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcsQ9WU84 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CcsQ9WU84 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcsQ9WU84 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CcsQ9WU84 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.29□□□□□ -0.28
CcsQ9WU84 Gm10602-201ENSMUST00000098239 609 ntBASIC13.29□□□□□ -0.28
CcsQ9WU84 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcsQ9WU84 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.29□□□□□ -0.28
CcsQ9WU84 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.29□□□□□ -0.28
CcsQ9WU84 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcsQ9WU84 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CcsQ9WU84 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcsQ9WU84 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CcsQ9WU84 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CcsQ9WU84 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CcsQ9WU84 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CcsQ9WU84 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CcsQ9WU84 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CcsQ9WU84 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CcsQ9WU84 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CcsQ9WU84 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CcsQ9WU84 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CcsQ9WU84 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CcsQ9WU84 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CcsQ9WU84 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CcsQ9WU84 Gm7290-201ENSMUST00000104990 617 ntBASIC13.28□□□□□ -0.28
CcsQ9WU84 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CcsQ9WU84 Gm12918-201ENSMUST00000120234 636 ntBASIC13.28□□□□□ -0.28
CcsQ9WU84 Gm15710-201ENSMUST00000121821 636 ntBASIC13.28□□□□□ -0.28
CcsQ9WU84 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.28□□□□□ -0.28
CcsQ9WU84 Gm5075-201ENSMUST00000196916 622 ntBASIC13.28□□□□□ -0.28
CcsQ9WU84 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.28□□□□□ -0.28
CcsQ9WU84 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.28□□□□□ -0.28
CcsQ9WU84 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CcsQ9WU84 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CcsQ9WU84 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.28□□□□□ -0.28
CcsQ9WU84 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.28□□□□□ -0.28
CcsQ9WU84 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CcsQ9WU84 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CcsQ9WU84 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.28□□□□□ -0.28
CcsQ9WU84 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CcsQ9WU84 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CcsQ9WU84 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CcsQ9WU84 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CcsQ9WU84 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CcsQ9WU84 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CcsQ9WU84 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CcsQ9WU84 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CcsQ9WU84 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.27□□□□□ -0.28
CcsQ9WU84 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CcsQ9WU84 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CcsQ9WU84 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CcsQ9WU84 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CcsQ9WU84 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CcsQ9WU84 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CcsQ9WU84 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CcsQ9WU84 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CcsQ9WU84 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.27□□□□□ -0.29
CcsQ9WU84 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CcsQ9WU84 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CcsQ9WU84 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CcsQ9WU84 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.27□□□□□ -0.29
CcsQ9WU84 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.27□□□□□ -0.29
CcsQ9WU84 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CcsQ9WU84 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CcsQ9WU84 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CcsQ9WU84 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CcsQ9WU84 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CcsQ9WU84 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CcsQ9WU84 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CcsQ9WU84 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CcsQ9WU84 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CcsQ9WU84 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms