Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tubd1Q9R1K7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubd1Q9R1K7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
Tubd1Q9R1K7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.36■□□□□ 0.37
Tubd1Q9R1K7 Gm7889-201ENSMUST00000185591 958 ntBASIC17.36■□□□□ 0.37
Tubd1Q9R1K7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.36■□□□□ 0.37
Tubd1Q9R1K7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.36■□□□□ 0.37
Tubd1Q9R1K7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubd1Q9R1K7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubd1Q9R1K7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tubd1Q9R1K7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tubd1Q9R1K7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tubd1Q9R1K7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tubd1Q9R1K7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tubd1Q9R1K7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tubd1Q9R1K7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Gm13216-201ENSMUST00000117145 591 ntBASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubd1Q9R1K7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubd1Q9R1K7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubd1Q9R1K7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
Tubd1Q9R1K7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.33■□□□□ 0.37
Tubd1Q9R1K7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubd1Q9R1K7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubd1Q9R1K7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tubd1Q9R1K7 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.33■□□□□ 0.37
Tubd1Q9R1K7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubd1Q9R1K7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Tubd1Q9R1K7 Actl10-202ENSMUST00000226583 1501 ntBASIC17.33■□□□□ 0.37
Tubd1Q9R1K7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubd1Q9R1K7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubd1Q9R1K7 Gm13186-201ENSMUST00000118031 316 ntBASIC17.33■□□□□ 0.36
Tubd1Q9R1K7 Gm6433-201ENSMUST00000118634 875 ntBASIC17.33■□□□□ 0.36
Tubd1Q9R1K7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.33■□□□□ 0.36
Tubd1Q9R1K7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubd1Q9R1K7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tubd1Q9R1K7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.33■□□□□ 0.36
Tubd1Q9R1K7 Gm45058-201ENSMUST00000205810 766 ntBASIC17.33■□□□□ 0.36
Tubd1Q9R1K7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.33■□□□□ 0.36
Tubd1Q9R1K7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tubd1Q9R1K7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.33■□□□□ 0.36
Tubd1Q9R1K7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubd1Q9R1K7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubd1Q9R1K7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tubd1Q9R1K7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubd1Q9R1K7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tubd1Q9R1K7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms